Gene Bcenmc03_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3893 
Symbol 
ID6126726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp818292 
End bp819302 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID641651001 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001777534 
Protein GI170736274 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.216763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.15417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCG CCGCCGATGT GACGCGCATC CACGTGCTCG GCGCGGGCCG AATGGGGCAG 
GGCATCGCGC TCGTGTTCGC GTTCGCGGGC CTCGACGTGA CGCTGATCGA CTTCAAGCCG
CGCGACGCGG CCGGCCGGCA CGCGTTCGAC GTGCGCACAC GCGACGAGAT CATCCGGCCG
TTGCATGCGC AGATCGCGCT GGGCCGCATC GACACCGCGC AGGCGGATGC CGTCGTCGCG
CGCATCGCGC TCGTGGCGCG GGACGGCGCG GCCGATGCGG TGCGCGATGC CGACATCGTG
TTCGAGGCGC TCCCGGAAGT GCTCGATGCA AAGGCCGACG CGCTGCGCTG GCTTGGTCGA
CACGTCGATG CGCACGCAAC GATCGCGTCG ACCACGTCGA CGTTCGTCGT CACGGAATTG
CAGCGCCACG TCGTACACCC GGCGCGGATG CTGAACGCGC ACTGGCTGAA CCCCGCGCTG
CTGATGCCGC TCGTCGAGGT CAGCCGCAGC GATGCAACGG ATCAAGCCGT CGTCGACGCG
CTCGCGGCGC TGCTCGAACG CGTGGGCAAG AAGCCGGTGA TCTGCGGGCC GGCGCCCGGC
TATATCGTGC CGCGCATCCA GGCGCTCGCG ATGAACGAGG CCGCGCGGAT GGTCGAGGAA
GGCGTGGCCA GCGCCGAGGA CATCGACACG GCGATCCGCA CCGGCTTCGG CCCGCGCTTC
GCGGTGCTCG GGCTGCTCGA ATTCATCGAC TGGGGCGGCT GCGACATCCT GTACTACGCG
TCGCGGTACC TGGCCGGAGA AATCGGCCCG CGCTTCGCGC CGGCCGCGAG CGTCGTGCGC
AACATGGAAG CCGGGCGCGA CGGCGTGCGC ACCGGCGCCG GCTTCCACGA CTATGCGGCG
GTCGACGTGC CCGCGTACAT GCGCCAGCGG CTCGGCGAAT TCGCGCGGCT GCTCGACCAT
CTCGGGCTGG CGCCGGCGTT CGACAGCGCG CGGCGCGACG CCGGGCGCTG A
 
Protein sequence
MKAAADVTRI HVLGAGRMGQ GIALVFAFAG LDVTLIDFKP RDAAGRHAFD VRTRDEIIRP 
LHAQIALGRI DTAQADAVVA RIALVARDGA ADAVRDADIV FEALPEVLDA KADALRWLGR
HVDAHATIAS TTSTFVVTEL QRHVVHPARM LNAHWLNPAL LMPLVEVSRS DATDQAVVDA
LAALLERVGK KPVICGPAPG YIVPRIQALA MNEAARMVEE GVASAEDIDT AIRTGFGPRF
AVLGLLEFID WGGCDILYYA SRYLAGEIGP RFAPAASVVR NMEAGRDGVR TGAGFHDYAA
VDVPAYMRQR LGEFARLLDH LGLAPAFDSA RRDAGR