Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3887 |
Symbol | |
ID | 6126720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 810580 |
End bp | 811878 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641650995 |
Product | major facilitator transporter |
Protein accession | YP_001777528 |
Protein GI | 170736268 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.84675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.218515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAATG GTGCGCAGTA CCGCCCCGGA CGGGCGTGGT CCATCGCGAC GATGCTCGCG CTGATGATGC TGGTGAATTT TCTCGACAAG GTCGTGCTCG GCCTCGTGTC GGTGCCGATG ATGCGCGACC TGCATCTGAG CCCGACGCAG TTCGGCGTGA TCGGCGGCAG CCTCAACTGG CTGTTCGCGG TTGCGGCGGT CGCGGGCGGC ATCGCCGCGA ACCGCTGGCC CGCGAAATGG CTGCTGTTCG CGATGGCCGC CGCGTGGGCG CTGCTGCAAT TGCCGATGCT GGTGGCCGGC TCGATCTGGG TCGTCATCGC GTGCCGCGTG CTGCTCGGCA TCGGCGAAGG CCCCGCGTCG CCGGTTGCGA CGCACGCGAT CTACAAGTGG TTTCCCGATA CGCGGCGCAA CCTGCCCGTC GCGCTGCTGC ACCAGGGCAG CGCGCTCGGC CTGCTGATCG CGGGGCTGTC GATTCCGGTC ATCACGACGC ACTGGGGCTG GCGCGCGAAC TTCGCGGTGC TCGCGCTGCT CGGGGCCGTG TGGTGCATCG CGTGGGCGGT GCTCGGCGAG GAGGGCACGC TGGCACGGAC GCCGCGCGCG GCGGGCGGCG ATCGCGTGCC GTACGGGCGG CTGCTGACCG ACCGCACGGT GCTCGGCAAT TTCCTCGGCC ACTTCGCGGC GAACTGGATT CTCGCGATGA CGCTCACCTG GATGCCGACC TACCTGCAAC TCGGGCTCGG CTTCGGGCCG CACGAGGCCG GCCGCATGTT CGCGCTGTTC GTCGCGGTCA CGTCGCCGCT CAGCCTCGTG CTTGCGTGGC TGTCGCAAAC CCTGCTCGCG CGCGGCATGC CGTCGCGGCA TGGCCGCGGC ACCTTCATCG CGATCACGCT GGCGGTCGCC GGCGCGATGC TGGCGATGCT GCCGGTGCCG GACGTCCCGC GCGCGGCCAA GCTCGTGCTG CTGACGCTCG GCAGCGGCCT GACGCTGACG ATGTACTCGA TCGGCCCCGC GATGCTCGCC GAAGTGACGC CGGACGCGCA ACGCGGCGGC GTGCTCGCGC TCAGCAACGG TTTCGCGTCG CTCGCCGGCC TGGGCGCGCC GGTCGTCACC GGGATGCTGA TCGAGGGCGC TGGCGCGTCG GTCGCGCACG GCTTCGAACA GGCCAGCATC GTGTGCGGCG TCGTGCTGAT TGCGTGCGGC GTGCTCGGCG CCTGGTGTCT CGATCCGCAG CGCTCGCTGC GGCGTCTCGC GGGAGAACCG GCGCGCGCCG CGCCGCCGGT CGGCGCGTGC GGCCGCTAG
|
Protein sequence | MTNGAQYRPG RAWSIATMLA LMMLVNFLDK VVLGLVSVPM MRDLHLSPTQ FGVIGGSLNW LFAVAAVAGG IAANRWPAKW LLFAMAAAWA LLQLPMLVAG SIWVVIACRV LLGIGEGPAS PVATHAIYKW FPDTRRNLPV ALLHQGSALG LLIAGLSIPV ITTHWGWRAN FAVLALLGAV WCIAWAVLGE EGTLARTPRA AGGDRVPYGR LLTDRTVLGN FLGHFAANWI LAMTLTWMPT YLQLGLGFGP HEAGRMFALF VAVTSPLSLV LAWLSQTLLA RGMPSRHGRG TFIAITLAVA GAMLAMLPVP DVPRAAKLVL LTLGSGLTLT MYSIGPAMLA EVTPDAQRGG VLALSNGFAS LAGLGAPVVT GMLIEGAGAS VAHGFEQASI VCGVVLIACG VLGAWCLDPQ RSLRRLAGEP ARAAPPVGAC GR
|
| |