Gene Bcenmc03_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3887 
Symbol 
ID6126720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp810580 
End bp811878 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content72% 
IMG OID641650995 
Productmajor facilitator transporter 
Protein accessionYP_001777528 
Protein GI170736268 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.84675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.218515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG GTGCGCAGTA CCGCCCCGGA CGGGCGTGGT CCATCGCGAC GATGCTCGCG 
CTGATGATGC TGGTGAATTT TCTCGACAAG GTCGTGCTCG GCCTCGTGTC GGTGCCGATG
ATGCGCGACC TGCATCTGAG CCCGACGCAG TTCGGCGTGA TCGGCGGCAG CCTCAACTGG
CTGTTCGCGG TTGCGGCGGT CGCGGGCGGC ATCGCCGCGA ACCGCTGGCC CGCGAAATGG
CTGCTGTTCG CGATGGCCGC CGCGTGGGCG CTGCTGCAAT TGCCGATGCT GGTGGCCGGC
TCGATCTGGG TCGTCATCGC GTGCCGCGTG CTGCTCGGCA TCGGCGAAGG CCCCGCGTCG
CCGGTTGCGA CGCACGCGAT CTACAAGTGG TTTCCCGATA CGCGGCGCAA CCTGCCCGTC
GCGCTGCTGC ACCAGGGCAG CGCGCTCGGC CTGCTGATCG CGGGGCTGTC GATTCCGGTC
ATCACGACGC ACTGGGGCTG GCGCGCGAAC TTCGCGGTGC TCGCGCTGCT CGGGGCCGTG
TGGTGCATCG CGTGGGCGGT GCTCGGCGAG GAGGGCACGC TGGCACGGAC GCCGCGCGCG
GCGGGCGGCG ATCGCGTGCC GTACGGGCGG CTGCTGACCG ACCGCACGGT GCTCGGCAAT
TTCCTCGGCC ACTTCGCGGC GAACTGGATT CTCGCGATGA CGCTCACCTG GATGCCGACC
TACCTGCAAC TCGGGCTCGG CTTCGGGCCG CACGAGGCCG GCCGCATGTT CGCGCTGTTC
GTCGCGGTCA CGTCGCCGCT CAGCCTCGTG CTTGCGTGGC TGTCGCAAAC CCTGCTCGCG
CGCGGCATGC CGTCGCGGCA TGGCCGCGGC ACCTTCATCG CGATCACGCT GGCGGTCGCC
GGCGCGATGC TGGCGATGCT GCCGGTGCCG GACGTCCCGC GCGCGGCCAA GCTCGTGCTG
CTGACGCTCG GCAGCGGCCT GACGCTGACG ATGTACTCGA TCGGCCCCGC GATGCTCGCC
GAAGTGACGC CGGACGCGCA ACGCGGCGGC GTGCTCGCGC TCAGCAACGG TTTCGCGTCG
CTCGCCGGCC TGGGCGCGCC GGTCGTCACC GGGATGCTGA TCGAGGGCGC TGGCGCGTCG
GTCGCGCACG GCTTCGAACA GGCCAGCATC GTGTGCGGCG TCGTGCTGAT TGCGTGCGGC
GTGCTCGGCG CCTGGTGTCT CGATCCGCAG CGCTCGCTGC GGCGTCTCGC GGGAGAACCG
GCGCGCGCCG CGCCGCCGGT CGGCGCGTGC GGCCGCTAG
 
Protein sequence
MTNGAQYRPG RAWSIATMLA LMMLVNFLDK VVLGLVSVPM MRDLHLSPTQ FGVIGGSLNW 
LFAVAAVAGG IAANRWPAKW LLFAMAAAWA LLQLPMLVAG SIWVVIACRV LLGIGEGPAS
PVATHAIYKW FPDTRRNLPV ALLHQGSALG LLIAGLSIPV ITTHWGWRAN FAVLALLGAV
WCIAWAVLGE EGTLARTPRA AGGDRVPYGR LLTDRTVLGN FLGHFAANWI LAMTLTWMPT
YLQLGLGFGP HEAGRMFALF VAVTSPLSLV LAWLSQTLLA RGMPSRHGRG TFIAITLAVA
GAMLAMLPVP DVPRAAKLVL LTLGSGLTLT MYSIGPAMLA EVTPDAQRGG VLALSNGFAS
LAGLGAPVVT GMLIEGAGAS VAHGFEQASI VCGVVLIACG VLGAWCLDPQ RSLRRLAGEP
ARAAPPVGAC GR