| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3883 |
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| Symbol | |
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| ID | 6126716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 806494 |
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| End bp | 807240 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641650991 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001777524 |
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| Protein GI | 170736264 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.445893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCA AGAGCAAATC GGCGTTGATC ACGGGCGGTA CCAGCGGCAT CGGTCTGGCC
ACCGCGAAGC GGTTCATTGC AGAAGGCGCG CGCGTCGCGG TGACGGGGCG CGACGAAAGC
GTATTCGAGC GCGTGAAGGC GGAGCTCGGC GAGCATGCGG TCGTGCTCAA GGGCGATGTG
CGGTCGCTCG ACGACATGCG CGTAATTGCC GGCGAGGTTA ACGAGAGGTT CGGCGGTCTC
GACGTGGTAT TCGCCAATGC CGGCTGGGCG TTCCCGTCCG CCGTCAACGA CATCGACGAC
ACGCTCTACA ACGACATCAT GGACGTCAAC GTCAAGGGCG TGGTGTTCAC GCTTCAAGCG
GCGCTGCCGT ACTTGCGCGA AGGTTCGTCG GTGATCCTCA ATACCTCGTT CGTCGCGCAG
ACCGGCAAGC ACGGCATCTC GCTGACCGCG GCGGCGAAGG CCGCCGTGCG CTCGCTGGCC
CGCAGCTGGT CGTACGAATT TCTCGACCGG AAAATCCGCT TCAACGCGAT TGCGCCCGGC
GCGATCGATA CGCCGCTGCT TTCGAAGTGG GGCAAGCCCG ACGAATGGGT GCGCGACCGC
AAGGCCGAAT TCGCCGAAAC GATTCCGGTG GGCCGCATGG GCCACGCCGA CGACATCGCG
TACGCGGCGC TCTATCTCGC CAGCGACGAA TCGTCGTTCG TCGTCGGCAC CGAGCTGGTG
GTCGATGGCG GGGCGTCGCA GCTCTGA
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| Protein sequence | MRLKSKSALI TGGTSGIGLA TAKRFIAEGA RVAVTGRDES VFERVKAELG EHAVVLKGDV
RSLDDMRVIA GEVNERFGGL DVVFANAGWA FPSAVNDIDD TLYNDIMDVN VKGVVFTLQA
ALPYLREGSS VILNTSFVAQ TGKHGISLTA AAKAAVRSLA RSWSYEFLDR KIRFNAIAPG
AIDTPLLSKW GKPDEWVRDR KAEFAETIPV GRMGHADDIA YAALYLASDE SSFVVGTELV
VDGGASQL
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