| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3875 |
|---|
| Symbol | |
|---|
| ID | 6126708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 798685 |
|---|
| End bp | 799578 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641650983 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001777516 |
|---|
| Protein GI | 170736256 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.22343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCT TTGTTACGGG AGCATCGGGA TTCGTCGGCT CGGCCGTCGT GGCCGAGCTC
GTGGCCGCCG GGCACTCGGT GCTCGGGCTG GCGCGGTCCG ACGCGGCCGC GGCGTCGGTT
GCCGCGGCCG GCGCCGACGT TCATCGCGGG TCGCTCGAGG ATCTCGACAG CCTCACGCGC
GGCGCCGAAG CCGCCGATGC GGTGATCCAC ACGGGATTCA ATCACGACTT CTCGCGCTTC
GCGCAGAACT GCGAACTCGA CCGCCGCGCG ATCGAGACGA TCGGCGCGGC GCTCGTCGGC
TCGGCGCGGC CGCTAATCGT CACGTCGGGC CTGGCGCTCG TCGCGCCAGG CCGCGCGGCG
ACGGAGGACG ATCCGCACGT GCCGGTGTCG GAAAATTATC CGCGTGCGTC CGAAGCGACG
GCGGTCGCGC TCGAAGCGCG CGGCGTGCAC GCGTCGGTCG TCCGGCTGCC GCCGTCCGTG
CACGGCGACG GCGATCACGC GTTCGTGCCG CGCCTGATTG CGTTCGCGCG GGAGAAAGGG
GTGGCGGCGT ACATCGGCGA CGGCGCGAAC CGCTGGCCGG CCGTGCACCG GCTCGACGCG
GCGCGCGTGT ATCGGCTAGC GATCGAGCGC GGCGCGGCCG GCGCGCGCTA TCACGCGGTC
GACGATACGG GCGTGCCGTT TCGCGCGATC GCCGAGGTGA TCGGGCGGCG GCTGAACGTG
CCGGTCGTCG CGAAGTCGGC GGCGGAAGCC GGCGAACACT TCGGCTGGTT CGCGAGATTT
GCGGGGATGG ATGCGCCCGC AACCAGCGAG CGCACGCGAG CATCGCTCGG CTGGGCGCCG
ACGCAGCCGA AGTTGCTGGC CGATATCGAC CGGCCGCGGT ATTTCGAAAG CTGA
|
|---|
| Protein sequence | MRVFVTGASG FVGSAVVAEL VAAGHSVLGL ARSDAAAASV AAAGADVHRG SLEDLDSLTR
GAEAADAVIH TGFNHDFSRF AQNCELDRRA IETIGAALVG SARPLIVTSG LALVAPGRAA
TEDDPHVPVS ENYPRASEAT AVALEARGVH ASVVRLPPSV HGDGDHAFVP RLIAFAREKG
VAAYIGDGAN RWPAVHRLDA ARVYRLAIER GAAGARYHAV DDTGVPFRAI AEVIGRRLNV
PVVAKSAAEA GEHFGWFARF AGMDAPATSE RTRASLGWAP TQPKLLADID RPRYFES
|
|---|
| |