Gene Bcenmc03_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3869 
Symbol 
ID6126702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp793103 
End bp793741 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID641650977 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001777510 
Protein GI170736250 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.61339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CGGCTGCCGT ACTCGCCATC CTCGCTGCGC TGTTTCTCGG CGCGATGATC 
CCGGGCCCGA GCTTCGTGCT GGTTGCCCGC AACTCGATCG GGCTGTCGCG CCGCGACGGG
CTGGCCACCG CGCTCGGCAT GGGCATCGGC GGCATCGTGT TCGGCGGCGT CGCGCTGGCC
GGGCTGTACA CGCTGCTGCA GGCCGTCGAA TGGCTGTACG TGGGGCTCAA GGTCGCGGGC
GGCGTGTACC TGATCTACAT GGCGTCGAAG ATCTGGCGCG GCGCCGACCG GCCGATCGCG
ATGGACGATC CGCAGGCGAT GGCCGGCGGC AGCGCGCGCA AGTCATTCTG GACGGGCCTC
ACGACCCAGC TCAGCAACCC GAAGACGGCG ATCTGGTACG GCAGCATCTT CGCGGCGCTG
CTCCCGCAGC ACCCGCCGCT GTGGTGCTAT CTCGCGCTGC CGCCGCTCGT GTTCGCGGTC
GAGTTCGGCT GGTACACGCT GGTCGCGCTG TGCTTCTCGA CGCGCCGGCC GCGCGAACTC
TATCTGCGCG CGAAGAAGTG GGTCGACCGC ATCGCGGCCG GCGCGATCGC GCTGCTGGGG
CTGCGGCTGA TCCTGAATGC GCCGAAAGCG GGGATCTGA
 
Protein sequence
MTASAAVLAI LAALFLGAMI PGPSFVLVAR NSIGLSRRDG LATALGMGIG GIVFGGVALA 
GLYTLLQAVE WLYVGLKVAG GVYLIYMASK IWRGADRPIA MDDPQAMAGG SARKSFWTGL
TTQLSNPKTA IWYGSIFAAL LPQHPPLWCY LALPPLVFAV EFGWYTLVAL CFSTRRPREL
YLRAKKWVDR IAAGAIALLG LRLILNAPKA GI