| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3860 |
|---|
| Symbol | |
|---|
| ID | 6126693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 781283 |
|---|
| End bp | 782593 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641650968 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_001777501 |
|---|
| Protein GI | 170736241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.532791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGC TCGGCACGAC GGTCGTAAAC GGCGGCGGTC AGATCGGCGG CGTGCAGATT
CCCGGCACGA ACCCGACGAC GGCCACCAGC ATCGGCAACG CGGTCGGCAG CCTCGGCAAC
GGCGTGCAAT CGCTCGGCAA CGGCATCGCG GCCGGCCTGG GCTCGATCGG CGTGTCGGCG
AACCCGCTCG GGCCGACGAT CACGTCGACC ACCGGCCTGC TGACCGGCGC CGGCGGCGCG
GTCAACAACC TCGGCAATGC CGTGACGAGC CTCGGCACCG GTCCGCTGTC GCCGCTCGCG
CCCGCGACGA CCCTGGTCGG CAGCCTCGTC AACACGGTCG GCACCGCGGT CAACTCGACC
GCATCGGCGC TGAACACGGC ACTGAACAGC TCGCCGGTCC AGCAGATCGA AACGCAGCTC
GGCAAGGTGA TCAACCCGAT CACGAACACG CTGACCGGCG GCGTCACGAC GCCGGGCGCC
ACGCAGACGC TCGGCGGCGT GACGCTGCTC GGCACGCCGC TCAACGGCCT GCTGAGCACG
CTCGGCAGCG GCCTCGGGCT CGCGGGCACG AAGGTCGGCG GCGCGACCGA CAACCCGGTC
GGCGCGGGCC TCGGCGGCGT CGTGACGCAG CTCGGTAACA CGGTGACGTC GACGGGCGGC
CTCGTCCACG ACAACAACGC GGGCAGCTCC AGCAGCGGCA CGGGCGGCAG CAATCCGCTC
GCGCCGATCA CGGGCCTGCT CGGCACGTTG ACGGGCGGCC TCGGCGGCGG CAGCTCGAGC
GGTTCGGGCG GCACCAGCGG CACCAGCAGC GGCGGCCCGC TCGCACCGAT CACCGGCCTG
CTCGGGACGG TGACGGGCGC ACTCGGCGGC ATCGGTTCGA GCGGCACCAG CGGCACGGGC
GGAACGAGCG GGACCGGCGG CACCAGCGGT ACGGGTGGCG CAGGGCTCGG CGGCCTGCTG
GCGCCGGTCA CCAATCTCGT CAACGCGCTG ACGCCGCTCG GCGCGAGCCT CACCGGCACC
GTCACGACGC CCGGCGGCAA CCTGTCCGGC ACGCTCGGCG GGGTGCTGAC GAGCGGCCCG
GTCGGCACGC TCACGGGTGC GCTGGGCACA CCGGCCGGCT CGGCCGGCGC CACCGGCACG
GTCAGCCCCG GCGGCGCAGC AGGCACCGTG ACGACGCCGG GCGGCAGCGG CTCCGTGGTG
ACCGGCCTGA CCGGCAGCAC GGGCGGCGGC GCCGCGGGCG GCACCGGCAA CCTGCTGTCG
CCGGTGACCA ACCTGCTCGG CGGTCTGCTG GGCGCCGGCA CCAAGAAGTA A
|
|---|
| Protein sequence | MTALGTTVVN GGGQIGGVQI PGTNPTTATS IGNAVGSLGN GVQSLGNGIA AGLGSIGVSA
NPLGPTITST TGLLTGAGGA VNNLGNAVTS LGTGPLSPLA PATTLVGSLV NTVGTAVNST
ASALNTALNS SPVQQIETQL GKVINPITNT LTGGVTTPGA TQTLGGVTLL GTPLNGLLST
LGSGLGLAGT KVGGATDNPV GAGLGGVVTQ LGNTVTSTGG LVHDNNAGSS SSGTGGSNPL
APITGLLGTL TGGLGGGSSS GSGGTSGTSS GGPLAPITGL LGTVTGALGG IGSSGTSGTG
GTSGTGGTSG TGGAGLGGLL APVTNLVNAL TPLGASLTGT VTTPGGNLSG TLGGVLTSGP
VGTLTGALGT PAGSAGATGT VSPGGAAGTV TTPGGSGSVV TGLTGSTGGG AAGGTGNLLS
PVTNLLGGLL GAGTKK
|
|---|
| |