| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3843 |
|---|
| Symbol | |
|---|
| ID | 6126676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 758012 |
|---|
| End bp | 761224 |
|---|
| Gene Length | 3213 bp |
|---|
| Protein Length | 1070 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641650951 |
|---|
| Product | CzcA family heavy metal efflux protein |
|---|
| Protein accession | YP_001777484 |
|---|
| Protein GI | 170736224 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.591686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.830088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGC GCCTGATCCG CTTTGCGATT GCGCATCGCT GGCTGGTGAT GCTGGCGATC
GCGGCCGTGG CCGCGCTCGG CGTGTTCAGC TACCAGCGCC TGCCGATCGA CGCGGTGCCC
GACATCACGA ACGTGCAGGT GCAGATCAAC ACTTCCGCGC CCGGCTACTC GCCGCTCGAG
GCCGAGCAGC GCATCACCTA TCCGGTCGAG ACCGTGATGG CCGGGCTGCC GGGGCTGGAG
CAGACGCGCT CGATCTCGCG CTACGGGCTG TCGCAGGTCA CCGTGATCTT CAAGGACGGC
ACCGACATCT ACTTCGCGCG GCAGCTCGTC AACGAGCGCA TCCAGGAAGC GAAGGACAAG
CTGCCGCCCG GCATCGCGCC CGCGATGGGG CCGACGTCGA CCGGCCTCGG CGAGATCTAC
CTGTGGACCG TCGAGGCCGA CGCCAACGCG CGCAAGCCCG ACGGCACGCG CTATACGGCG
GCCGACCTGC GCGAGCTGCA GGACTGGGTC GTGCGGCCGC AACTGCGCAA CGTGCGCGGC
GTGACCGAGG TCAACTCGAT CGGCGGCTAC GTGAAGGAAT ACCGCGTCGC GCCGAATCCG
GCGAAGCTGA TGTCATACGG GCTGACGCTT GCCGACGTCG TGCGCGCGCT CGAACGCAAC
AACGACAACG TCGGTGCCGG CTACATCGAA AAGCGCGGCG AGCAGTATCT GGTGCGCGTG
CCGGGCCAGG CGCGCACCGT CGACGACATC GCGAACATCG TGCTGACCAA CGTCGGCGGC
GTGCCGGTGC GGATGAAGGA CGTCGGCGTG GTCGACATCG GCCGCGAACT GCGCACCGGC
GCCGCGACGT CGAACGGCGA GGAAGTCGTG CTCGGCACGG TGTTCATGCT GATGGGCGAG
AACAGCCGGA CGGTGTCGAA GGCGGTCGCC GCGAAGATGG AGGACGTGAA CCGCACGCTG
CCGGCCGGCG TGAAGGCGAT TCCGGTGTAC GACCGCACGG TGCTGGTCGA GAAGGCCGTC
GCCACCGTGA AGAAGAACCT GCTCGAAGGC GCGGTGCTCG TGATCGCCGT GCTGTTCCTG
TTCCTCGGCA ACATCCGCGC GGCGCTGATC ACCGCGCTCG TGATTCCGCT GTCGATGCTG
ATGACCTTCA CCGGCATGGT CAACGCGAAG GTGAGCGCGA ACCTGATGAG CCTCGGCGCG
CTCGACTTCG GGATCATCGT CGACGGCGCG GTGGTGATCG TCGAGAACTG CGTGCGGCGG
CTTGCGCATG CGCAGTCGGC GGCCGGCCGG CCGCTCACGC GCGACGAGCG CTTTGCCGAA
GTGTTCGGCG CATCGCAGGA GGCGCGCCGC GCGCTGATCT TCGGGCAACT GATCATCATG
GTCGTGTATC TGCCGATATT TGCGCTGACC GGCGTCGAAG GCAAGATGTT CCACCCGATG
GCGATCACCG TCGTAATGGC GCTCGCCGCC GCGATGGTGC TGACCGTCAC GTTCATTCCC
GCGGCCGTCG CGTTGTTCAT CGGCGAGCGG GTCGAGGAGA AGGAGAACCG GTTGATGGGC
TGGGCGCGGC GTGCGTACGA ACCGGTGCTC GCCGCGTTCA TGACGCGCCC GGCGCGCGTG
ATGATCGGGG CGGGCGCGAT CGTGCTGGTC ACGCTCGGGC TCGCGACGCG GCTCGGCAGC
GAGTTCATTC CGAGCCTGAA CGAGGGCGAC CTGGCCGTGT CCGCGCTGCG GATTCCCGGC
ACGAGCCTGT CGCAATCGGT CGAGATGCAG AAGTCGATCG AGAAGACGCT GAAGGCGCGC
TTCCCGGAGA TCGAGCGCGT GTTCGCACGC ACAGGCACGG CCGAGATCGC GGCCGACCCG
ATGCCGCCGA ACCTGTCGGA CGGCTACATC ATGCTGAAGC CCGCCGACAC GTGGCCCGAC
CCGAAGAAGC CGCGCGATCG GCTCGTGCGC GAGATCGAGG AAGCGCTCGC CGAGCTGCCA
GGCAACGCGT ACGAGTTCTC GCAGCCGATT CAGCTGCGCT TCAACGAACT GATTTCAGGC
GTGCGCAGCG ACGTCGCCGT GAAGATCTTC GGCGACGACA TGGCCGTGCT GAACCAGACC
GGCGAGCAGA TCGCGGCCGC GTTGCAGAAG GTGCCGGGCG CGTCGGAGGT GAAGGTCGAG
CAGACCACGG GGCTGCCGGT GCTGACCGTC AACCTCGACC GCGACAAGCT CGCGCGCTAC
GGCGTGAGCG TGGCCGACCT GCAGGACTCG GTGGCTGCGG CCGTCGGCGG GCAGAAGGCC
GGCACGCTGT TCCAGGGCGA CCGCCGCTTC GACATCGTCG TGCGGCTGCC CGACGAGCTG
CGCTCCGACA TCGAGGCGAT CAAGCGGCTG CCGATCGCGC TGCCCGCGCC AGCCGCCGGC
GCCAGCGCGC CGCTCGCGGC GGCGCCGTAC GTGCCGCTCG CGGAGCTCGC GACGATCGAC
GTGGCCCCCG GCCCGAACCA GATCAGCCGC GAGGACGGCA AGCGGCGGGT GGTCGTCAGC
GCGAACGTGC GCGGCCGCGA CGTCGGCTCG TTCGTCGCCG ATGCGCGCGA GCAGTTGCAG
CAGGACGTGC GCGTGCCGGC CGGGTACTGG GTGTCGTGGG GCGGGCAGTT CGAGCAGCTG
CAAAGCGCGA GCGAGCGCTT GAAGCTCGTC GTGCCGCTCG CGCTGTTCAT GGTGTTCGTG
CTGCTGTTCG TGATGTTCAA CAACGTGAAG GACGGGCTGC TGGTGTTTAC CGGCATTCCG
TTCGCGCTGA GCGGCGGCGT CGTGTCGCTG TGGCTGCGCG GGATTCCGCT GTCGATCACG
GCGGCGGTCG GCTTCATCGC GCTGTCCGGC GTGGCCGTGC TCAACGGTCT GGTGATGATC
TCGTTCATCC GCAACCTGCG CGACGAAGGC ATGCCGCTCG ACGCCGCGGT GCACGACGGC
GCGCTCACGC GGCTGCGCCC GGTGCTGATG ACCGCGCTGG TCGCGTCGCT CGGCTTCCTG
CCGATGGCGT TCGCGACCGG CACCGGCGCC GAGGTGCAGC GCCCGCTTGC GACGGTCGTG
ATCGGCGGTA TCCTGTCGTC CACGGCGCTG ACGCTGCTGG TGCTGCCGGT GCTGTACCGG
GTCAGCCATG CGGTGTCGTG GCGCGCGGCG TTGCGCGGCG GCTTCGGCGC GGACGTGCTG
CGCCGGCTGG GTTTTTTCAA GGGTAATGCG TGA
|
|---|
| Protein sequence | MFERLIRFAI AHRWLVMLAI AAVAALGVFS YQRLPIDAVP DITNVQVQIN TSAPGYSPLE
AEQRITYPVE TVMAGLPGLE QTRSISRYGL SQVTVIFKDG TDIYFARQLV NERIQEAKDK
LPPGIAPAMG PTSTGLGEIY LWTVEADANA RKPDGTRYTA ADLRELQDWV VRPQLRNVRG
VTEVNSIGGY VKEYRVAPNP AKLMSYGLTL ADVVRALERN NDNVGAGYIE KRGEQYLVRV
PGQARTVDDI ANIVLTNVGG VPVRMKDVGV VDIGRELRTG AATSNGEEVV LGTVFMLMGE
NSRTVSKAVA AKMEDVNRTL PAGVKAIPVY DRTVLVEKAV ATVKKNLLEG AVLVIAVLFL
FLGNIRAALI TALVIPLSML MTFTGMVNAK VSANLMSLGA LDFGIIVDGA VVIVENCVRR
LAHAQSAAGR PLTRDERFAE VFGASQEARR ALIFGQLIIM VVYLPIFALT GVEGKMFHPM
AITVVMALAA AMVLTVTFIP AAVALFIGER VEEKENRLMG WARRAYEPVL AAFMTRPARV
MIGAGAIVLV TLGLATRLGS EFIPSLNEGD LAVSALRIPG TSLSQSVEMQ KSIEKTLKAR
FPEIERVFAR TGTAEIAADP MPPNLSDGYI MLKPADTWPD PKKPRDRLVR EIEEALAELP
GNAYEFSQPI QLRFNELISG VRSDVAVKIF GDDMAVLNQT GEQIAAALQK VPGASEVKVE
QTTGLPVLTV NLDRDKLARY GVSVADLQDS VAAAVGGQKA GTLFQGDRRF DIVVRLPDEL
RSDIEAIKRL PIALPAPAAG ASAPLAAAPY VPLAELATID VAPGPNQISR EDGKRRVVVS
ANVRGRDVGS FVADAREQLQ QDVRVPAGYW VSWGGQFEQL QSASERLKLV VPLALFMVFV
LLFVMFNNVK DGLLVFTGIP FALSGGVVSL WLRGIPLSIT AAVGFIALSG VAVLNGLVMI
SFIRNLRDEG MPLDAAVHDG ALTRLRPVLM TALVASLGFL PMAFATGTGA EVQRPLATVV
IGGILSSTAL TLLVLPVLYR VSHAVSWRAA LRGGFGADVL RRLGFFKGNA
|
|---|
| |