Gene Bcenmc03_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3808 
Symbol 
ID6126641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp723453 
End bp724523 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID641650915 
Productmembrane protein 
Protein accessionYP_001777449 
Protein GI170736189 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.944991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.27996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CGCTCCCGAC CCGACTGCCG CCTCTCGTGC GCCACGCGCT CCGCCCGCTG 
CTCGACCCGT ACCGCCGCTA CCGGCACGCG AAGCTGATTC ACGCGGCGCG CGTCGCGCTC
GCGGTGCTCG TGTCGATCGC GCTGTCCACG GGGCTGAATG TGCCGCATGG CGAGTGGTCA
ACGATCACCG TGCTGATCGT CGTCGGCGGG CTGCAGCATC ACGGCAACAT CCGCAAGAAG
GCGGCCGAGC GCGCGCTCGG CACGTCGATC GGCGCGCTGG CGGGGCTCGG GCTGATCCTC
CTCTACTCGT TCCTGCACGC GCCGTTCGCG ATCTACCTGC TGATGGCCGT CTGGTGCGGC
GTTTGCGCGT ATCACGCGAT CGGCAAGGCC GGCTACATCG CGCTGCTGTC GGCGATCACG
ATGGTGATCG TCGCCGGGCA TGGCGACAAC GAGATCGTCG ACGGCCTGTG GCGCGCGGTG
AACGTGCTGG CCGGCATCGC GATCGCGCTG GCGTTCTCGT TCGCGCTGCC GCTCTACGCG
ACCTATTCGT GGCGCTACAA GCTCGCCGAC GCGCTGCGCG CGTGCGCGGC CGTGCATGCG
CGACTCGCGG GCGACCGTCA GGTCACCGAC GACGCACACC TGAAGGAAAT GGCCGCGCTG
AGCACGCTGC TCGTGCAGTT GCGCTCGCTG ATGCCGTCGG TGTCGAAGGA ATGCGAGACG
TCGATGACAC AGCTCGAGGC GATCCAGCGC AGCCTGCGCC TGTGCATCGG TTATCTGGAG
ATCCTGTCGA GCGCGCTGCC CCCCGCCGAC GACGTGGCGG CCCGCGAATA CATGCGCGTC
GAGATGAAGA CCTTGAACCG GCGCATCCGC GACACGCTGG TCGGCGCGAG CCGCGCGCTC
AAGTTCGGCA CGCCGAGCCG GCTCGCCCCG CGCCGGCGGC CGGTCGACCC GCTGCACGAC
GCGCCGCCGC CGCAGTTGTC CGGCTACGTG TCGATCACGG CCAAGCTGGC CGGCGAAGTC
GATCAATTGC GCGAGCGGCT GCTCGATACT GCGCGGTCAT GGAATATCTG A
 
Protein sequence
MTAPLPTRLP PLVRHALRPL LDPYRRYRHA KLIHAARVAL AVLVSIALST GLNVPHGEWS 
TITVLIVVGG LQHHGNIRKK AAERALGTSI GALAGLGLIL LYSFLHAPFA IYLLMAVWCG
VCAYHAIGKA GYIALLSAIT MVIVAGHGDN EIVDGLWRAV NVLAGIAIAL AFSFALPLYA
TYSWRYKLAD ALRACAAVHA RLAGDRQVTD DAHLKEMAAL STLLVQLRSL MPSVSKECET
SMTQLEAIQR SLRLCIGYLE ILSSALPPAD DVAAREYMRV EMKTLNRRIR DTLVGASRAL
KFGTPSRLAP RRRPVDPLHD APPPQLSGYV SITAKLAGEV DQLRERLLDT ARSWNI