Gene Bcenmc03_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3794 
Symbol 
ID6126627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp709174 
End bp709941 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID641650901 
ProductABC transporter related 
Protein accessionYP_001777435 
Protein GI170736175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.921656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0592425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC TTACCGTTGA CAACCTGCAC AAGAAATTCG GCGACAACGA GGTGTTGAAG 
GGCGTGTCGA TGAAGGCGAA GGCCGGCGAC GTGATCAGCA TCATCGGCTC GAGCGGCTCC
GGCAAGAGCA CGTTCCTGCG CTGCATCAAC TTCCTCGAAC AACCGTGCTC GGGGCAGATC
ACGATCGGCA GCGAGCCGAT CCAAACCACG CGCGACCGCA ACGGTTCGCT GCGCGTGGCC
GACCAGAAGC AGCTGCAGCG CATGCGCACG AAGCTGTCGA TGGTGTTCCA GCACTTCAAC
CTGTGGGCGC ACATGACGGT GCTGGAGAAC GTGATCGAGG CGCCGATGGC CGTGCTCGGC
GTCGGCAAGG ACGAGGCGAT CGACCGGGCG CGCAAGTATC TGGAGAAGGT CGGCCTCGCG
CCGCGCGTCG AGGGCATGTA TCCGTCGCAC CTGTCGGGCG GCCAGCAGCA GCGCGTGGCG
ATTGCGCGTG CACTCGCGAT GGAGCCCGAA GTGATGCTGT TCGACGAACC GACGTCGGCG
CTCGACCCGG AACTGGTGGG CGAAGTGTTG AAGGTGATGC AGAAGCTCGC GGAGGAAGGC
CGCACGATGG TCGTCGTCAC GCACGAGATG GGCTTCGCGC GCAACGTGTC GAACCACGTG
ATCTTCCTGC ATCAGGGGAA GATCGAGGAA GAGGGCGATC CGCAACAGAT CCTCGTGAAT
CCGAAGAGCG AGCGGCTCGG GCAGTTTCTG TCGGGGCGGT TGAAGTAA
 
Protein sequence
MYKLTVDNLH KKFGDNEVLK GVSMKAKAGD VISIIGSSGS GKSTFLRCIN FLEQPCSGQI 
TIGSEPIQTT RDRNGSLRVA DQKQLQRMRT KLSMVFQHFN LWAHMTVLEN VIEAPMAVLG
VGKDEAIDRA RKYLEKVGLA PRVEGMYPSH LSGGQQQRVA IARALAMEPE VMLFDEPTSA
LDPELVGEVL KVMQKLAEEG RTMVVVTHEM GFARNVSNHV IFLHQGKIEE EGDPQQILVN
PKSERLGQFL SGRLK