| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3777 |
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| Symbol | |
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| ID | 6126610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 689563 |
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| End bp | 692115 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641650884 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001777418 |
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| Protein GI | 170736158 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.028091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGGT TGCCCAATTC GTTGATGCTT GACGCGGGTA TCGAGCAGAC GAACCGAGCG
CTCGTCCTGG AAACGCCCCT CGGGGCGAAG GTACTGTTGC CGCAACGCGC CATGGGTGAA
TCGCGCGTGG GCCGGGATTT CGAGCTCACA GTGGACGTCG TGTCCCGGGA GCGCGCGCTT
CATTTGAAGA AGCTGATGGC GCAACCTGTC ACATTATGGG TGCGTCAAGC CGACGAGTCG
TACCTGCCTT GGCATGGCTA CGTCCATGCA ACGCGACGCC TCGGAGCGGA CGGGGGACTC
ACTTACTATC AGCTTTCGTT TTCGTCGTGG ATGCGCTTTC TGCAGTACCG CAAGGACGCG
CGCATTTTCC AGGACCTAAC GACCGCCGAC ATCCTGACTA AAGTGTTCAG CGGCCATTCG
CAGGCGCGCG GTCATTTCCG GCTCGATGTG AAAGACCCGG GCGCGGTTCG CTCGTACTGT
ACTCAGTATG AAACCGACCA CAATTTCGTC CATCGGTTGA TGGAGTCGGA GGGATGGTTC
ACGTATGTCG AGCATGCAGA GGACGGTAAG TCGCATACGA TTGTCGTGAC CGACGACCTC
TTCAATTGCA AAGCGCTCGC TACCCAGCGA GTACCGTTCT ATCGCGGCGA CCGAGACGGC
CAGGCTGGCA CACTCGTCGA ATGGAGCGGC GAGCGTACGA CGCAAAGCGT CGGATATGCG
TTCAGCACGG CGGATTACAA ACGTCCAGCA CGCACGTTGC AGCGGGCGGA CCGGTCCACG
GTTGACCAGG GCGATATCCC GCAGGAGTTG GAAGTCTACG AATACGCGGG CCACTATAGC
TTTCCGGTCA CCGGCGAGTC CTACGACCGT GGCGAGCGCG CTATGCGAAT TCGGCTTGAA
GAGATGGCGT CGCGCAGCAA ACGGTTTTTC GGCGTGGGCA GTGTTTCATG CATGGACGCC
GGTCGATGGT TCACGCTCGA AGACCATCCC GAGCACGACG CAGACAAGCC TGAGGACCGC
GAGTTCGCGA TTCTTGGCGT GCGTTGGGCT ATCCAGAACA ATCTGCCGCT GGGCAACAGC
CGCCCCTTTC CGGGTAGCCT GCAGCGACGC CTGTCGCGTC TGCGTGCCGA ATACAAGGAT
CGGCAGGCTG CATTCGTATC GAAGGACCCG TTAGGCAATG AAAGTTTCGT GCTGGCCGAA
ATCGAGGTCC AGCGCCGCTC GGTGCCATTC CGCAGCCCGT TCGAGCATAG AAAGCCGGTC
ATGCATATGC AGACCGCCAC TATCGTGGGA CCGGCGGGTG AGGAGGTGTA CACGGACGAG
TTGAACCGGG TGAAGGCTCA GATGCACTGG GACCGTCTGG GGAGCAATAA CGAGACGTCA
TCGTGCTGGA TGCGGGTAAT ACTGCCGCAC GCCGGCAAGG GATTCGGCGG TGTGTTCGTC
CCTCGAATCG GGCAGGAAGT GGCCGTCAAT TACCTCGACG GGGATTGCGA CAGGCCGGTC
GTCAGTGGAG TGCTCTTTCA CTCTGTCAAC ACGCCACATT GGCATTCGAA CGGCCTGCTG
TCCGGTTTCA AGTCGCAGGA GTACAGCGGT CAGGGTTTCA ATCAACTCGT CTTCGACGAC
TCCACGTCGC AGAACCGGGC GCAGCTTTTC AGCTCGACGG CGAATTCGTA TCTTCACATC
GGCTATCTCA TCGACCACAG CGGCAATACG CGCGGCAACT ACCTTGGCAC GGGCTTCGAA
CTGAAGACCG AGGCGTCAGG TGCCCTGCGG GCCGGACGAG GGCTCTACGT ATCGACCTAC
GCCCGCGGCG GCACGTCGAG TCAGCCGCTG GATGTGAAGG AAGCCACGCA ACACCTTATC
GATTCGAGCG GCGTGATTCA GCATCGCTCA CTCGCGGCAG CCGACGGCCA GGCCGAGACC
CTGGACGATG CTCAGGATGC CATCAAGGAC TTCGCTGCGA CGACGCAGAG CGATGCACAG
GGCTCTATGG CGGGCGGCAG GACAGCGGGT GGCGGCACCG GAAGCGCCAA TGCGTTTTCG
CAACCCGTCA TGTTGCTTGC GAGCCCGGCT GACATGGGCC TGTCGACGCA GAAGTCGCTC
CACGCAGCAG CTACCCAGCA CGTCAATTTG GTTAGCGGAG AGAGCACCTA CGTTTCGGTG
GCGAGGTCGT GGATTGCCAG TATTGGCGAG AAATTAAGCT TCTTCGTGCA GAATTCCGGT
ATCAAGTTGT TTGCCGGCAA AGGCAAGGTC GAAGTGCAGG CGCAGTCGGA CAACATCGAA
CTTACGGCAG ACAAGACTGT AAAGGTCGTG TCCACTTCCG ATTCGGTGAA CGTTACAGCC
CAGAAGGAAA TCACCCTTAC CGCCGGCGGC GCATCGATTC GCATCGCCGA AGGTAAAATC
TTCATCCATG CGCCGGGGCT GGTCGAGGTC AAGGGCAGTC CGCTCACCTT CGATGGCCCG
GCGGGCGATA GCGCGTCGGC GCAGCTTGCG CCTTCAAAGT CGTGCGCCCA GCAGTTCGCA
GCCGCGGCCC AGGCCGGCTC GGCACTCGTG TAG
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| Protein sequence | MGRLPNSLML DAGIEQTNRA LVLETPLGAK VLLPQRAMGE SRVGRDFELT VDVVSRERAL
HLKKLMAQPV TLWVRQADES YLPWHGYVHA TRRLGADGGL TYYQLSFSSW MRFLQYRKDA
RIFQDLTTAD ILTKVFSGHS QARGHFRLDV KDPGAVRSYC TQYETDHNFV HRLMESEGWF
TYVEHAEDGK SHTIVVTDDL FNCKALATQR VPFYRGDRDG QAGTLVEWSG ERTTQSVGYA
FSTADYKRPA RTLQRADRST VDQGDIPQEL EVYEYAGHYS FPVTGESYDR GERAMRIRLE
EMASRSKRFF GVGSVSCMDA GRWFTLEDHP EHDADKPEDR EFAILGVRWA IQNNLPLGNS
RPFPGSLQRR LSRLRAEYKD RQAAFVSKDP LGNESFVLAE IEVQRRSVPF RSPFEHRKPV
MHMQTATIVG PAGEEVYTDE LNRVKAQMHW DRLGSNNETS SCWMRVILPH AGKGFGGVFV
PRIGQEVAVN YLDGDCDRPV VSGVLFHSVN TPHWHSNGLL SGFKSQEYSG QGFNQLVFDD
STSQNRAQLF SSTANSYLHI GYLIDHSGNT RGNYLGTGFE LKTEASGALR AGRGLYVSTY
ARGGTSSQPL DVKEATQHLI DSSGVIQHRS LAAADGQAET LDDAQDAIKD FAATTQSDAQ
GSMAGGRTAG GGTGSANAFS QPVMLLASPA DMGLSTQKSL HAAATQHVNL VSGESTYVSV
ARSWIASIGE KLSFFVQNSG IKLFAGKGKV EVQAQSDNIE LTADKTVKVV STSDSVNVTA
QKEITLTAGG ASIRIAEGKI FIHAPGLVEV KGSPLTFDGP AGDSASAQLA PSKSCAQQFA
AAAQAGSALV
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