| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3770 |
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| Symbol | |
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| ID | 6126604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 681216 |
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| End bp | 682658 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641650878 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001777412 |
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| Protein GI | 170736152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0658463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TACTCGTCGC GCTGGCCGTC AGCGCATTCG CCGCCGGGTG TGCAGTGCAG
CCCGCGCAGC ATCCGGCGCT GAACGACTCC GTCCAGACGC TCGCGCCCAC CGCGTGGGAT
ACCGACGTGC CGCGCGCGGA CATCGACGCC GCCGCCTGGT GGGCGCAGTT CCACGACCCC
GTGCTCGACC GGCTGATCGC GACCGTGCTC GACAGCAACC TCGATCTGCA AGCCGCCGCC
GAACGCGTGA AGCAGGCGCA GGCGCTGACC GTGCAGAAAC GCGCGGTGCT GCTGCCCGAA
CTCGACGCGA CCGCGCATGC GGCCGACGCG CGGCAGAACA CGCCGCCGCC GCTCGGTTAT
GTGCGGCAGG CTGGTGCGGG TCTTGCGCTG AGCTGGTCGC CCGACGTGTT CGGCGGTGAA
CGGCTCGATC TGCTGGCCGC TCAAGCGGAG CTGGTCGGGC AAAAGCATGC GGAAGATGCG
ATGCGCCTCG CGCTTGCAGC GGACGCGGCA TCCGCGTATG TCGATCTGCG CTGGGCGCAG
CAGGAACTGA AGATCCTGCA GGACAACGCG AAGATCCGGC AGCATGCGCT CGAACTCACG
CGCAAGCGGC AGGCGTTCGG GCTGTCGACG GAACTCGACG TGACGCGTGC GCAGAACCAG
CTCGATGCGC TCGAAGCGAG GATTCCGCCG ACGCAGGCGC AGATTTCGCA TCAGCTCAAT
CTGATCGCCG TGTATTCGGG GCGGACGCCG GAATCGGTCG ATCGGCTTTT GCTGGCGCAG
GCGGGGGAGA TTCCCGCGCC GCCAGTTGGC GCGCCGGGGA CGCTGCCTTC GCAGGCGTTG
TTGCGGCGGC CGGATGTGCT GACTGCCTAT GCGCAGGTTG AGCGGCGTGC CGCGCAGGTC
GGCGTGGCGA AGGCCGAGCG GTATCCGAAG TTCTCGTTGA ACCTGACGGA CGGGATTCTG
GCAGCTTCGT ATCTCGGGTT GCCGACGTTG ACCGATAACC TGTTCAGTGC TGCGCTGAGT
GCGACGAGCC CGATCTTCAA CGCGGGACGC ATTACCGCCG ATATCTCGCA GAGCGAAAGC
CGGATGCGCG AGTCGGAACT CGGGTTACGG CAGACGATGC TGCAAGCGCT GCGGGAAGTC
GAAGATGCGC GCGCGAATCT CGTCAGTTCC GATGAGGCAA CGCGGCGACT GGGTAGCGCA
TTGGCGGCTT CCGATAAAGC GCTTGGGCTG GCGAATCAGC TTTATAAGGG CGGCGCGACG
GATTTTCTGG ATGTGCTGTC GGCGCAGGAG GTCTATCTGC GGGATTCGGA TTCGCTCAAT
CAGGTCAAGC GCGAGCATGC GCTGGCGGCG GTGGCGTTGT ATCGGTCGCT TGGGGGTGGG
TGGAGCCGGA ATGACGCGGC GGGGGGAACA CAGACGGAAA CTGACGCTGT GGCGAAAAAC
TAG
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| Protein sequence | MKKLLVALAV SAFAAGCAVQ PAQHPALNDS VQTLAPTAWD TDVPRADIDA AAWWAQFHDP
VLDRLIATVL DSNLDLQAAA ERVKQAQALT VQKRAVLLPE LDATAHAADA RQNTPPPLGY
VRQAGAGLAL SWSPDVFGGE RLDLLAAQAE LVGQKHAEDA MRLALAADAA SAYVDLRWAQ
QELKILQDNA KIRQHALELT RKRQAFGLST ELDVTRAQNQ LDALEARIPP TQAQISHQLN
LIAVYSGRTP ESVDRLLLAQ AGEIPAPPVG APGTLPSQAL LRRPDVLTAY AQVERRAAQV
GVAKAERYPK FSLNLTDGIL AASYLGLPTL TDNLFSAALS ATSPIFNAGR ITADISQSES
RMRESELGLR QTMLQALREV EDARANLVSS DEATRRLGSA LAASDKALGL ANQLYKGGAT
DFLDVLSAQE VYLRDSDSLN QVKREHALAA VALYRSLGGG WSRNDAAGGT QTETDAVAKN
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