| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3723 |
|---|
| Symbol | |
|---|
| ID | 6126557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 629693 |
|---|
| End bp | 630811 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641650831 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001777365 |
|---|
| Protein GI | 170736105 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.497805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.164029 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCAG CAGATCAGCG GTGGGTCGTT ATCTATTTGA GTACGGGGTT TTCGTTGGCC
CAGGCCGCGC GCCTCGGCGA AGCCTTCAAC CTGGCGAATC GCCTGCATGC GTACAGCGCG
GATTACCAGC TCAAGTACGT ATCCGAAAGC GGGGGACTGT TGCAGTCGTC GTCCGGCGTG
CGCATCGCGG CCGAGCCGTT CGGCGACGAA CATAGCCGCC GTGCGCGCGC GTTCTTTCAT
CTTCATGGCG AGCGCGCGGC CGTCAATTGG GACGACGCAT TGCAGCGGCG CCTGTCCGAC
ATTCGCCAGC ATGCGCGCTG GATCGTCGAT GCGATGGAGT TGCCCGCGCT CGCCGCCACG
CGGCGGCCGT CGTCGTCAAT CGACGTGCGG CCCGGCCGGG CCGGGCGCCG CGCCACCACG
ACGATCGAAT TGCAGGCCGG CGAGACCGAC GTGTTCGCCG CCGCGCTCGA CATGTTTCGC
GTCGACCTCG GCGACGGCGC CGCGCAGGAG ATCGCCAGCA ACATGATGCG GCCGGTCGAG
CAGCGCTACG CGCAGTCGAT GTGGGCGTTT CGCGAACTGA GCGCGAGCCC GTCGATCCGG
ATGTCCGCGC AGCGGTTGCG TGCGCAGAGC GTGAACCGCA TCTCGATCGC GAACGCCGCG
CAGGCGGCCG CGATGAGCGA GCGCAATTTC CTGCGGCGCT TCAAGAAGGA AATCGGCGTG
ACGCCGACCG AGTTCGTCCA GCACGTGCGG CTCGAGCGGG CGTGCCACAT GCTGATCCAT
ACGACGCTGC CGGCCGACAA GGTCGCGCGG CGCACCGGCT TCGGCAGCGG CGAGCGGCTC
GCGAAGCTGT TTCGTCAGCG GCTGTTGATG TCGCCGACCG AATTTCGCGT CGCCGAGCGG
GAAAAGATCC TCGCGCACGG CGCGGCGTCG CCCGATCCTG ACGAACGGCT TGCCGCCGCG
TGTTGCGACG GCGACGGGGC GGATTGCGAC GCCTGCGTGG CCGCGCGCGG GAAAACGGGA
CGGATACCCG TAAAATCGAC GGATCGCGAT CTCGATTCCC GGTTTCCATG CCCTTCCTCC
CCACTACCGC CACCGCCCCT TTCTGCCCGT CGGAAGTAA
|
|---|
| Protein sequence | MNAADQRWVV IYLSTGFSLA QAARLGEAFN LANRLHAYSA DYQLKYVSES GGLLQSSSGV
RIAAEPFGDE HSRRARAFFH LHGERAAVNW DDALQRRLSD IRQHARWIVD AMELPALAAT
RRPSSSIDVR PGRAGRRATT TIELQAGETD VFAAALDMFR VDLGDGAAQE IASNMMRPVE
QRYAQSMWAF RELSASPSIR MSAQRLRAQS VNRISIANAA QAAAMSERNF LRRFKKEIGV
TPTEFVQHVR LERACHMLIH TTLPADKVAR RTGFGSGERL AKLFRQRLLM SPTEFRVAER
EKILAHGAAS PDPDERLAAA CCDGDGADCD ACVAARGKTG RIPVKSTDRD LDSRFPCPSS
PLPPPPLSAR RK
|
|---|
| |