| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3690 |
|---|
| Symbol | |
|---|
| ID | 6126524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 592743 |
|---|
| End bp | 593516 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641650798 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001777332 |
|---|
| Protein GI | 170736072 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.278242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCA TCGCCTCCCC CGCCATCGCG CTGCGCCGCT ACGACACGTG CGAAGCGTCG
GACGTGCACG ACTTCCACCA GGTCGTGCTC GGCGTCGACG GCGCGATGGT GATGGCGGTG
GACGGAATCG GCCGTCGCAT CGACCGGCAC GCGGCCTGGC TGATTCCGGC CGGCGCGCGC
CACGACTACG CGGGCCTCGG CGACAATCGC CAGCTCGTGA TCGACCTGCC CGCCGCGTCG
CTCGCGGTGC CTCAGCGACT GTTCGACCAT GCGCGCGCCG TGTCGATCGA CCCGGCGCTC
ACGTCGCTCG TCGCGCAGGT CGCGGCGGCG GCCGCGCAAC ACGATGCACC GGACGGCGAC
GCACGGCAGG CCGCCGCGCA CCGTTTCCAG TGGCAGGCCG CGGCACGCCT GTGCGACGCA
CTGCTCGACG ATGCGGGCAT CGCCGCGCCC GCGTCGGGCC TCGATTTCGC GCGCATCGAC
CGCTGGCTGC GCGCGCGGCT CGCCGACCCG CTGCGCATCG CCGATCTCGC CGCGCACTGC
GGCTACGGGA TGCGCCGGTT TCATCAACTG TTCGTCGACG CCTTCGGCGA AACGCCGCAT
CGCTACCTGC AGCGGCTGCG GCTCGACGCG GCCGTCGTGC TGCTCGCCGA CGGCCGGCAT
GCGCTCGTCG ACATCGCGGG CAGCGTCGGC TTCGCGGATC AGAGCACGTT CACGCATGCG
TTCACGAAGC GCTTCGGCGT GGCGCCGGGA CGCTGGCGCG GCGAACGGCA CTGA
|
|---|
| Protein sequence | MERIASPAIA LRRYDTCEAS DVHDFHQVVL GVDGAMVMAV DGIGRRIDRH AAWLIPAGAR
HDYAGLGDNR QLVIDLPAAS LAVPQRLFDH ARAVSIDPAL TSLVAQVAAA AAQHDAPDGD
ARQAAAHRFQ WQAAARLCDA LLDDAGIAAP ASGLDFARID RWLRARLADP LRIADLAAHC
GYGMRRFHQL FVDAFGETPH RYLQRLRLDA AVVLLADGRH ALVDIAGSVG FADQSTFTHA
FTKRFGVAPG RWRGERH
|
|---|
| |