| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3687 |
|---|
| Symbol | |
|---|
| ID | 6126521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 588933 |
|---|
| End bp | 590423 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641650795 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_001777329 |
|---|
| Protein GI | 170736069 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.390992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.167887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCAA GGTCACCCGA CGCAAACGGG CCGGCGGCGC CCGAGATGAC GGACGTGTCC
GTCACCGCTC CCGAGGCCGG CCGCAAGCTG TTCGTGATCA TGCGCACGCC GGACGAGCCG
TTGCTGGCGC AACTGCGCGG GCTCGGCTGG GAGATCACGG TCGCGAAGAC GGCCGGCGCC
GCGCAGAACA TGACCTGCGG CGTGAGCGTG GCCGCCGGGC TGGTCGATTT CACCGGGTTC
ACGTCGCGCG ACTATCCCGC GCTGAAGATG TGCCTGAGCC AGCCGGCGAT CGGCTGGATT
TCCATCGCGC AGGCCGGCAT CACGATCGGC CCCGCCGTGC GCGAGCTGAT CCGTAGCTAT
TGCTTCGATT ACGTGACGCT GCCGCTGCCG TACGAATGGA TTTCGCACGT GCTCGGCCAT
GCGCGCGGGA TGGCCGCGCT CGATCGCGTC GATGGCGCCG CCTATGCGGC GTCGATCGGC
GAACACGGGA TGATCGGCAA CTGCGAGGCG ATGCAGCAGC TGTTCAGCAC GATCCGCAAG
GTCGCGAAGA CCGACGCGAG CGTGTTCATC TCGGGCGAGT CGGGCACCGG CAAGGAGCTG
ACGGCGCTCG CGATTCACGA GCGCTCCGGC CGCGGCAAGG GGCCGTTCGT CGCGATCAAT
TGCGGCGCGA TTCCGCATCA CCTGCTGCAG TCGGAACTGT TCGGCTATGA ACGCGGCGCG
TTCACCGGCG CGAACCAGCG GCGCGCGGGC CGGATCGAAT CGGCGAACGG CGGCACGCTG
TTTCTCGACG AGATCGGCGA CATGCCGGTC GAAAGCCAGG CGAGCCTGCT GCGCTTCCTG
CAGGAGGGCA AGATCGAACG GCTCGGCGGC CAGGAATCGA TCGTGGTCGA CGTGCGGATC
ATCTCGGCCA CGCACGTCGA TCTCGACGGC GCGGTCGAGG CCGGGCGCTT CCGCGCGGAT
CTCTATCACC GGCTGTGCGT GCTGCGCATC CACGAGCCGC CGCTGCGCGC GCGCGGCAAG
GACATCGACA TCCTCGCGCA CTACGTGCTG CAGAAATTCA AGGCCGACAG CGGCCGCAAG
ATCAGCGGCT TCACGTCGGC CGCGCTCGAC GCGATGCGGC GCTACGAGTG GCCCGGCAAC
GTGCGCGAAC TGATCAACCG CGTGCGGCGT GCGATCGTGA TGGCCGAGAG CCGGCTGCTG
ACGCCGCACG ATCTCGGACT CGATACGCCC GGCGAAACCG AACCGGTGAC GCTCGAGCAG
GCGCGGGCGC TGGCCGAGCG CACCGCGATC GAGAACGCGC TACTGCGCAA CGACCACCGG
ATCAACAAGG CCGCCGCCGA ACTCGGCATT TCACGCGTGA CGCTCTACCG GATGATGATC
GAGCACGGGC TGAACGATCA CGACAACAAC GGCGGCAACG GCGGGAATGG CGACAGCGGC
GGGCACGACG GCGCGCCGTC GGGCGACGCG GGGCATCAGC GCGTCGGCTG A
|
|---|
| Protein sequence | MVARSPDANG PAAPEMTDVS VTAPEAGRKL FVIMRTPDEP LLAQLRGLGW EITVAKTAGA
AQNMTCGVSV AAGLVDFTGF TSRDYPALKM CLSQPAIGWI SIAQAGITIG PAVRELIRSY
CFDYVTLPLP YEWISHVLGH ARGMAALDRV DGAAYAASIG EHGMIGNCEA MQQLFSTIRK
VAKTDASVFI SGESGTGKEL TALAIHERSG RGKGPFVAIN CGAIPHHLLQ SELFGYERGA
FTGANQRRAG RIESANGGTL FLDEIGDMPV ESQASLLRFL QEGKIERLGG QESIVVDVRI
ISATHVDLDG AVEAGRFRAD LYHRLCVLRI HEPPLRARGK DIDILAHYVL QKFKADSGRK
ISGFTSAALD AMRRYEWPGN VRELINRVRR AIVMAESRLL TPHDLGLDTP GETEPVTLEQ
ARALAERTAI ENALLRNDHR INKAAAELGI SRVTLYRMMI EHGLNDHDNN GGNGGNGDSG
GHDGAPSGDA GHQRVG
|
|---|
| |