Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3685 |
Symbol | |
ID | 6126519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 586642 |
End bp | 587424 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641650793 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001777327 |
Protein GI | 170736067 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.304708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.133024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGAC TGATTGCCGC TGTTTCGATC GCCCTGCTCG CGGTATCCGC AGGCCCCGCC GTCGCGAAGG ACTGGACCAC GATCCGCTTC GGCACCGACG CCAGCTACGC GCCGTTCGAA TCGAAGGCGC CGGACGGCAA GCTCGTCGGC TTCGACATCG ACCTCGGCAA CGAGATCTGC GCGCGCCTGA AGGCCAAATG CGTGTGGCTC GAGAACGATT TCGACGGGAT GATTCCGGCG CTGAAGGCGA AGAAGTTCGA CGCGGTGCTG TCGTCGATGT CGATCACGCC GCAGCGCGCG CAGCAGATCG GCTTCACGAC GAAGATCTAC AACCAGCCGA CGCGGCTCGT CGTGAAGAAG GGCTCGTCGC TGCTGCCGAC CGCCGCATCG CTGAAGGGCA AATCGATCGG CGTCGAGCAG GGCACGACGC AGGAAACGTA TGCGAAGGCG TACTGGGGCA AGCAAGGCGC GAACGTCGTG TCGTACCAGA ACCAGGACGG CGTGTATGCC GACCTGATCG CCGGCCGCCT CGACGCGGCC CTCCAGGATG AAGTGCAGGC CGCGATCGGG TTCCTGAAAT CGCCGCGCGG CGCGAACTAC ACGTTCGTCG GGCCCGAGCT CGTCGACGAA AAGGTGCTCG GCATCGGCGC CGGCATCGGT TTGCGCCAGG AGGACACCGA CCTGAAGGCG AAGATCGACC GCGCGATCCA CGACATGGTC AAGGACGGCA CCTACAAGCG GCTCGCATCG AAGTACTTCG ACTTCGACAT CTACGGCGGT TGA
|
Protein sequence | MKRLIAAVSI ALLAVSAGPA VAKDWTTIRF GTDASYAPFE SKAPDGKLVG FDIDLGNEIC ARLKAKCVWL ENDFDGMIPA LKAKKFDAVL SSMSITPQRA QQIGFTTKIY NQPTRLVVKK GSSLLPTAAS LKGKSIGVEQ GTTQETYAKA YWGKQGANVV SYQNQDGVYA DLIAGRLDAA LQDEVQAAIG FLKSPRGANY TFVGPELVDE KVLGIGAGIG LRQEDTDLKA KIDRAIHDMV KDGTYKRLAS KYFDFDIYGG
|
| |