Gene Bcenmc03_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3681 
Symbol 
ID6126515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp583711 
End bp584364 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID641650789 
Producthypothetical protein 
Protein accessionYP_001777323 
Protein GI170736063 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.454602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0449743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT ATCCGCAGGT ATTACGCAAC CGGCCGCGCA TGGTCGCGGC GTTCGTCGCC 
GGCGTGCTGT GCGCGGTGCT GCTGCCGTTT CCGCTGCGCC CGACCGCGCG GGCGCTGATC
GGCTGGGATT GCGCGGTCTG GCTGTACCTC GTGCTGATGT GGGTGCGCAT GGTGACCGCG
CATCATCACA AGGTGCGCGA AGTCGCGGTC CGCGAGGACG AAAACGCGAC GACCGTGCTG
ACCGTCGTGT GCCTCGCGAC CGTCGCGAGC GTGGCGGCGA TCGCGATCGA ACTCGCGACC
GCCAAGAGCG TCGGCTTCAG CGCGGGGCTC AGCCACTACG CGATCACGGG CGCGACGCTG
TTCGGCGCGT GGTTCCTGAT CCCGACGATC TTCACGCTGC ACTATGCGCG GCTCTATTAC
GGCTCGCCGA GCAACGATCG CGCGCTCCGT TTCCCCGACC GGAACCCGGA GCCCGATTAC
TGGGATTTCC TGTATTTCGC GTTCACGCTC GCGGTCGCGT CGCAGACGGC CGACGTGTCG
CTCGCGAACC GCTCCGCGCG GCGCTCGGTG CTCGCGCAGT CGATCCTGTC GTTCTACTTC
AACATGGCCG TGCTCGGCTT GTCGATCAAC GTCGCGGCGG GGCTGCTGAG CTGA
 
Protein sequence
MTLYPQVLRN RPRMVAAFVA GVLCAVLLPF PLRPTARALI GWDCAVWLYL VLMWVRMVTA 
HHHKVREVAV REDENATTVL TVVCLATVAS VAAIAIELAT AKSVGFSAGL SHYAITGATL
FGAWFLIPTI FTLHYARLYY GSPSNDRALR FPDRNPEPDY WDFLYFAFTL AVASQTADVS
LANRSARRSV LAQSILSFYF NMAVLGLSIN VAAGLLS