| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3673 |
|---|
| Symbol | |
|---|
| ID | 6126507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 575495 |
|---|
| End bp | 576352 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641650781 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001777315 |
|---|
| Protein GI | 170736055 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.395777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAC TCGATCTCGA TGCCGTGCGC GCGTTCGTGC TGGTCGCCGA CCTCGCCAGT
TTCACGCGTG CCGCCGATGC GCTCGGCACC ACGCAATCGG CCGTCAGCCT GAAGCTGAAG
CGACTGGAGG CCCATCTCGG CAAGCCGCTG CTGGCGCGCA CGCCGCGCGT CGTCAAGCTG
GCCGCCGACG GCGAGAATTT CCTGCCGGCC GCCCGTGCGC TGCTCGACGC GCACGAGCGT
GCGCTCGGCG CGATCTCGAC CGGCACGGTG CGCCTGTCGC TCGGCGTCAG CGAGCACGTC
GCGGTGCCCG ACCTGCCGGC CGTGCTGACG AGCCTGCACC GGCAGGACCC GGGGCTGTCG
CTGGAAATGC ATCTCGGGGC GTCGACGAGC CTGCTCCCGC AATACGACGA ACGGCGGTTC
GACGCGGTGA TCGCGCGGCA CGAGCCTGGC GAGGACCCGC CGCGCGACGA CGCCACGCCG
CTGTTCACCG AGCCGCTGGC GTGGCTCGCC GCGCCCGACT GGGCGCCGCG CGCGGGCGAG
CCGCTGCCGC TCGCGGTGCT GGCCGGCCCC TGCGGCGTGC GAGCCGCCGC GCTGCGCGCG
CTCGATCGCG CGGGGTTGCC GTGGCGCGAG CGCTTCACGG GCGGCGGAGT CGCGGCGGTC
ACGGCGGCCG CCGCGGCCGG ATTGGCCGTC TGCCCGCTCG CGCGGCGCGT CGCCCCGCGC
ACGCTGGTCG ACGTCGGCGC GAAATTCGGG TTGCCGCCGC TGCCGCAATC GCAGGTCGTG
CTGTATTCGC GCGTCCGCGA CGCCCGCGCC GCCGCCGCGC TGCGCAGGTT TGCCGACAGC
CTTGCAATCT CGGCGTAA
|
|---|
| Protein sequence | MKVLDLDAVR AFVLVADLAS FTRAADALGT TQSAVSLKLK RLEAHLGKPL LARTPRVVKL
AADGENFLPA ARALLDAHER ALGAISTGTV RLSLGVSEHV AVPDLPAVLT SLHRQDPGLS
LEMHLGASTS LLPQYDERRF DAVIARHEPG EDPPRDDATP LFTEPLAWLA APDWAPRAGE
PLPLAVLAGP CGVRAAALRA LDRAGLPWRE RFTGGGVAAV TAAAAAGLAV CPLARRVAPR
TLVDVGAKFG LPPLPQSQVV LYSRVRDARA AAALRRFADS LAISA
|
|---|
| |