Gene Bcenmc03_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3642 
SymboldnaG 
ID6126476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp543086 
End bp544963 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content66% 
IMG OID641650750 
ProductDNA primase 
Protein accessionYP_001777284 
Protein GI170736024 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCGC ATTCGTTCCT GCAGGATTTG CTGAACCGCG TCGATATCGT CGACGTGGTG 
GGCCGGTACG TGCAGCTCAA GAAGGGCGGC GCCAACTTCA TGGGGCTGTG CCCGTTCCAT
AACGAGAAGA GCCCGTCGTT TACCGTGAGC CCGACCAAGC AGTTCTATCA CTGCTTCGGT
TGCGGCGCGC ACGGCACCGC GATCGGCTTC CTGATGGAGC ATGCGGGGCT CACGTTCCCC
GAAGCCGTGC AGGAACTCGC GCAATCCGTC GGGCTGACCG TGCCGCACGA ACCGTCGATG
CGCGGCGGCG GTGGGGGCGG AGGCGGTGGC GGCGACTATC CGGCGCCCGT GTCGAAATCG
GTGGCGACCG CGCTGTCCGA TGCGATGACG GCGGCCTGCG ACTACTACCG CAAGCAGTTG
CGCGGCGCGA CCGTCGCGAT CCAGTACCTG AAGAACCGGG GCCTGACCGG CGAGATCGCC
GCACGCTTCG GTCTTGGCTA TGCGCCGGAC GGCTGGCAGA ACCTCGAGGC CGCGTTCCCG
GACTATCGCG ACGAGTCGCT CGTCGAGGCG GGGCTCGTGA TCGTCAGCGA GAAAACCGAC
GCCCAGGGCG TCGCGCGCCG CTACGACCGG TTCCGCGAGC GGATCATGTT CCCGATCCGC
AACGTGAAGG GGCAGGTGAT CGGTTTCGGC GGCCGCGTGC TCGGCAGCGG CGAACCGAAG
TACCTGAATT CGCCTGAAAC GCCGTTGTTC AACAAGGGCA GCGAGCTGTA CGGGCTGTTC
GAGGCGCGGC TCGCGATTCG CGAGCGCAAG TACGTGCTGG TCGTCGAAGG CTACATGGAC
GTCGTCGCGC TCGCGCAGCT CGGGTTTCCG AACGCGGTCG CGACGCTCGG CACCGCATGC
ACGCCGATTC ACGTGCAGAA GCTGCTGCGC CAGACCGACA CGGTCATTTT CAGTTTCGAC
GGCGATTCGG CCGGGCGGCG CGCGGCCCGG CGCGCGCTCG AGGCCTGCCT GCCGCATGCG
GGCGACAACC GCACGATCCG GTTCCTTTTT CTGCCGACCG AGCACGATCC GGACAGCTAC
GTGCGCGAAT TCGGCGCGGA GGCGTTCTCC GAGCAGGTCG AACGCGCGAT GCCGCTGTCG
CAATTTCTGT TGAACGAAGC GATTGCCGGC AAGGCGCTCG ATCAGCCGGA AGGCCGCGCG
AAGGCGCTCT TCGATGCGAA GCCGCTGTTG CAGGCGCTGC CCGCGAACGC GTTGCGCGCG
CAGATCATGC ACATGTTCGC CGACCGTCTC GACATCCCGT TCGAAGAGGT CGCGGCGCTG
TCGGACGTCG ATACGCGCAT CGCGACGCCG CCGCGCCAGG CGCCCGCGCG CAGCGAGCGG
CGCCGCGTGA CGGACAGCGA AAAGCGCGCG TTGCGTACGC TGGTGATGCA TCCGCGCATC
GCATCGCAGC TTGACGACGA ACAGATTGCG ACCCTGCGCG CGCTGCCGCG CATCGGCGAG
CTGTTCGCGG AAGTCGTCGA TCATGCGCGC GCGCTGGGCG ACGGCGCGGA GTTCCGGCTG
CTGTCGGATG TCCTCAGGAC GTCCTCGAAC GGGGCGACTT ACGAGGAAAT CTTCCGCGAA
ATTCTGGACT ATGATGAAAA CGTCCGCGAT TTGCTGTTAC AGAATCCGGA AGACGAGACG
GTGCCCGAGC GGCAGCGTGA GCAGGAGAGG ATCGCGGGGG AGGAGCTGCA GGCAGCGGTG
CTCAAGATGC GCTATGACGC CTGCTGCGAC CGGCTGGACA GGCTGGCGCG GCAATCCACC
TTCACCCCCG AGGAACTGGC CGAATTGACG GAATTGAACC AGCAGCGAAC CGACATGAAG
CGTCGGCTCG GGCTGTAG
 
Protein sequence
MIPHSFLQDL LNRVDIVDVV GRYVQLKKGG ANFMGLCPFH NEKSPSFTVS PTKQFYHCFG 
CGAHGTAIGF LMEHAGLTFP EAVQELAQSV GLTVPHEPSM RGGGGGGGGG GDYPAPVSKS
VATALSDAMT AACDYYRKQL RGATVAIQYL KNRGLTGEIA ARFGLGYAPD GWQNLEAAFP
DYRDESLVEA GLVIVSEKTD AQGVARRYDR FRERIMFPIR NVKGQVIGFG GRVLGSGEPK
YLNSPETPLF NKGSELYGLF EARLAIRERK YVLVVEGYMD VVALAQLGFP NAVATLGTAC
TPIHVQKLLR QTDTVIFSFD GDSAGRRAAR RALEACLPHA GDNRTIRFLF LPTEHDPDSY
VREFGAEAFS EQVERAMPLS QFLLNEAIAG KALDQPEGRA KALFDAKPLL QALPANALRA
QIMHMFADRL DIPFEEVAAL SDVDTRIATP PRQAPARSER RRVTDSEKRA LRTLVMHPRI
ASQLDDEQIA TLRALPRIGE LFAEVVDHAR ALGDGAEFRL LSDVLRTSSN GATYEEIFRE
ILDYDENVRD LLLQNPEDET VPERQREQER IAGEELQAAV LKMRYDACCD RLDRLARQST
FTPEELAELT ELNQQRTDMK RRLGL