Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3624 |
Symbol | |
ID | 6126458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 513858 |
End bp | 516326 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641650731 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001777266 |
Protein GI | 170736006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.749548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACATA TCCTCCTCGG CTGGCTGCTC GCCGCCGTCG TGTCGGCCGC CCACGCGGCC GCTCCCGCTC CGGCCGCCGC GTCGGCCGCC TCCGGCGCCG CGCCCGCACT GACGCCACAA GAGGCGCGGC AGGCACTGAA CGTGCTCGAA AACCCGCGCG ATCGCGCGCA GGTCGAAACG ACGCTGCGCG CGATCGCGGC CGTCGGCGCG TTGAGCGCGC CCGCCGTGCC GGCCAGCGCG GCGCCTGCCA CCAGCGGCGC CTCGGCTGCC GCGGCGCCGG CCGCGCTCAC GTCGAACGGG CTCGCCTCGA TGCTCGTCCG CCAGGGATCG CGCTGGGCCA CGCAGATCGG CAACGCGCTG CAGGAATCGC TGCGCTCGCT GCTCGATATC GGTTCGGTGG GAAGCTGGTG GCACGACAAG CTCGTCAGCG CCGACCAGCG CGCGGATCTC ACTCGCACGC TCGGCATCCT CGTCGCGGTA CTGCTGCCTG CGCTCATCGT CGAATGGCTC GCGAAGCGGC TGCTGCGACG CGCGCTGGCC ACGGTGGCCG CGCGCCGCGC CGACACGTTG CGCCACACCG CATCCGATTC CGCCGCGTCG GACGAAGTCC ACGCGCCGCC GCCCGATACG TCCACCCCAC CCGACACCGC AGCCGCAGAC ACCGCAGGCG CCACCCCCGC ATCCTCGCAA AGCCGAGGCC ACGCCCGCCG GCACACCACG CTGCTGCAGC GGATGCCGCG CGCACTCGTC AGTCTCGCGC TGCGCGCGGT GCCGCTGCTC GTGTTCGTCG GCGTCGCGAG CCTGACGATG TCGGTGCTCG TCGAAGCAGA CACGCCGATC GAAGCCGCGC TCGAAGCGTT GATCGACACC TACGTGATCT GCCGACTCAT CACGATCGTC AGCCGGCTGT TCTTCCAGCC CGATGCGCGG CAGTTGCGGC TGCTGCATAT CAGCGACGCA TGGGCCGATT TCGTGCAACG CTCGATCGCA CGGATCGTGA TCGTGGTCGG CGCGTGCACG GCGGCCGTCG AGATTGCCGC GAACTTCGGC CTGAGCGAAG CCGGCCATGT CGCGCTGCTG AAGGCCGTCG CCCTCGTCGG GCACGTGATG ATCTCGGTGC TGATCCTGCA GTGTCGCCGG CCGGTCGCGG CACGGATTCG TGCCGCCGGC GCGGATCGTC CGGCCTTCAC GGTCGTCGGC AACGCGCTCG CGGACGCGTG GGCGCCCGTG TCGGTCTTCA TCGTGATGGC ACTGTGGTTC GTGTGGGCGC TCGACGTCCA CAACGGCTAT CGCGTGCTGA TCACGCTCGG CGGCCGCTCG ATCGCCGTGA TGATCGCGAT GCGGATGGTG TCGATCGTCG TGTTCGGCGC GCTCGCGCGG CTGTTCCAGC GCCGCGACGA CGACCGTACG CTCGTTCATC TGCACGCGTA CCGCTACTAC CCGCTGCTGC GCCAGATCGT GTCGGGGGCG ATCGGCATCG TGACCGTCGT GCTGCTGCTG CAGATCTGGG GCGTGCCGAT CTTCCGCGCG TTCGAGACGG GCACGATCGG CCACCGGCTC GCGTCCGCGC TGGTGACGAT CGCGATCGCG GCGATCGTCG CGCTCGTCGT GTGGGAGGCG GCCAACATCG CGATCGAGCG CCGGCTGCAG CGCTGGACGC GCGAAGGCAA CCTGGTGCGC GCCGCGCGGC TGCGCACGCT GCTGCCGATG CTGCGCTCGC TGCTGTTCGT GATGATCGCG CTCGTCGTCG TGCTGACGGG CCTCAGCGAG CTCGGCGTCA ACGTCGGCCC GCTGCTGGCC GGCGCCAGCA TCTTCGGCGT CGCGCTCGGT TTCGGGTCGC AGAAGCTCGT GCAGGATTTC ATCACCGGGA TCTTCCTGCT GATGGAAAAC GCGATGCAGG TCGGCGACTG GGTCACGCTC GCCGGCGTGT CGGGCACGGT CGAATACCTG TCGATCCGCA CGGTGCGGCT GCGCGCCGGC GACGGGTCGC TGTACACGAT CCCGTTCAGC TCGGTGACGA CCGTCAACAA CACGAATCGC GGGCTCGGCA ACGCGGCCGT CAAGGTGAGC ATCGCGTACG GCGAGGACAT CGACCGCGCG ATCGCGACGC TGAAGGAAAT CGGCGCCGCG TTGCGCGACG ATCCGAAATA CCACGACGGC ATCCTGTCGG ACTTCAGCTA CTGGGGTATC GATCAGGTCG ACGGCGCGGC GCTCGCGCTG GCCGGGCAGA TGCAATGTAC GGACTCGGCA CGCTGGGGCG TGCAGCGCGA ATTCAACCGG CGGATCGCGG AAACGTTCCG CGAACGCGGA ATCCGGATCG CCAATCCGCA GCGCAGCGTC GTCGCCTATG CGGACGGATC GCGGCCGGTC GGCAGCGAGG AAAACGACCC GCGCCCCGAC ACGCGGAATG CCGCCGAGAC GGCAGCGCCG TCGCCATCGC CCGACGGAGC GGAGCGCAAG CCAGGCTGA
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Protein sequence | MRHILLGWLL AAVVSAAHAA APAPAAASAA SGAAPALTPQ EARQALNVLE NPRDRAQVET TLRAIAAVGA LSAPAVPASA APATSGASAA AAPAALTSNG LASMLVRQGS RWATQIGNAL QESLRSLLDI GSVGSWWHDK LVSADQRADL TRTLGILVAV LLPALIVEWL AKRLLRRALA TVAARRADTL RHTASDSAAS DEVHAPPPDT STPPDTAAAD TAGATPASSQ SRGHARRHTT LLQRMPRALV SLALRAVPLL VFVGVASLTM SVLVEADTPI EAALEALIDT YVICRLITIV SRLFFQPDAR QLRLLHISDA WADFVQRSIA RIVIVVGACT AAVEIAANFG LSEAGHVALL KAVALVGHVM ISVLILQCRR PVAARIRAAG ADRPAFTVVG NALADAWAPV SVFIVMALWF VWALDVHNGY RVLITLGGRS IAVMIAMRMV SIVVFGALAR LFQRRDDDRT LVHLHAYRYY PLLRQIVSGA IGIVTVVLLL QIWGVPIFRA FETGTIGHRL ASALVTIAIA AIVALVVWEA ANIAIERRLQ RWTREGNLVR AARLRTLLPM LRSLLFVMIA LVVVLTGLSE LGVNVGPLLA GASIFGVALG FGSQKLVQDF ITGIFLLMEN AMQVGDWVTL AGVSGTVEYL SIRTVRLRAG DGSLYTIPFS SVTTVNNTNR GLGNAAVKVS IAYGEDIDRA IATLKEIGAA LRDDPKYHDG ILSDFSYWGI DQVDGAALAL AGQMQCTDSA RWGVQREFNR RIAETFRERG IRIANPQRSV VAYADGSRPV GSEENDPRPD TRNAAETAAP SPSPDGAERK PG
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