Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3592 |
Symbol | sdhA |
ID | 6126426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 476914 |
End bp | 478689 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641650699 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001777234 |
Protein GI | 170735974 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.322313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA TCAAAACTTC CCTCCCGCGC CGCAAGTTCG ACGTCGTGAT CGTCGGCGCA GGCGGCTCCG GCTTGCGCGC AGCGCTGCAA CTGTCGCGCG CGGGCCTGTC GGTCGGCGTG CTGTCGAAGG TGTTCCCGAC GCGTTCGCAC ACGGTGGCCG CGCAGGGCGG TATCGGCGCG TCGCTCGGCA ACATGAGCGA AGACAACTGG CACTACCACT TCTACGACAC GATCAAGGGC TCCGACTGGC TCGGCGACCA GGATGCGATC GAGTTCATGT GCCGTGAAGC GCCGAACGTC GTGTACGAAC TCGAGCACTT CGGCATGCCG TTCGACCGCA ACGCGGACGG CACGATCTAC CAGCGCCCGT TCGGCGGCCA TACCGCGAAC TACGGCGAGA AGCCGGTCCA GCGCGCTTGC GCGGCCGCCG ACCGTACCGG TCACGCGCTG CTGCACACGC TGTACCAGCA GAACGTCGAA GCGAAGACGC AGTTCTTCGT CGAATGGATG GCGCTCGACC TGATCCGCGA CGCGGACGGC GACGTACTCG GCGTGACGGC CCTCGAGATG GAGACGGGCG ACGTCTACAT CATGGAAGGC AAGACCACGC TGTTCGCGAC GGGCGGCGCA GGCCGGATCT TCGCGGCATC GACGAACGCG TTCATCAACA CCGGCGACGG CCTCGGCATG GCGGCGCGCT CGGGCATCGC GTTGCAGGAC ATGGAGTTCT GGCAGTTCCA CCCGACCGGC GTGGCCGGCG CGGGCGTGCT GATCACCGAA GGCGTGCGCG GCGAAGGCGG TATCCTGCGC AACGCGAACG GCGAGCGCTT CATGGAGCGC TACGCGCCGA CGCTGAAGGA TCTGGCGCCG CGTGACTTCG TGTCGCGTTC GATGGACCAG GAAATCAAGG AAGGTCGCGG CGTCGGTCCG AACAAGGATC ACGTGCTGCT CGACCTGTCG CACATCGGCG CCGAGACGAT CATGAAGCGT CTGCCGTCGA TCCGCGAAAT CGCGCTGAAG TTCGCGAACG TCGACGCGAT CAAGGAACCG ATCCCGGTCG TCCCGACGAT CCACTACCAG ATGGGCGGCA TCCCGACCAA CATCCACGGT CAGGTCGTCG GCACGTCGCG CGATCACAAG GAACCGGTCA ACGGCTTCTA CGCAGTGGGC GAATGCTCGT GCGTGTCGGT GCACGGCGCG AATCGTCTGG GCACGAACTC GCTGCTGGAC CTCGTGGTGT TCGGCCGTGC GGCCGGCAAC CACATCGTCG AGCACGTGAA GAACCAGAAG GAACACAAGC CGCTGCCGGC TGACGCAGGC GAATTCTCGC TGGCGCGCCT GGCGAAGCTC GAGAAGTCGA GCTCGGGCGA GTACACGCAG GACGTCGCGA ACGACATCCG CGCGACGATG CAGAAGCATG CAGGCGTGTT CCGCACGTCG GCGCTGCTGA AGGAAGGCGT CGCTCAGATG GCCGACCTGA AGGCGCGCGT GGAAAACATC CACCTGAAGG ACAAGTCGAA GGTGTTCAAC ACCGCGCGCG TCGAAGCGCT CGAGCTGGAG AACCTGATCG AAGTGGCTCG CGCCACGATG GTGTCGGCCG AAGCGCGCAA GGAAAGCCGC GGTGCACACG CACACAGCGA CTACGAACAC CGCGACGACG ACAACTGGCT GCGCCACACG CTGTGGTACA GCGAAGGCGA TCGCCTCGAC TACAAGCCGG TTCAAATGAA GCCGCTGACG GTCGAATCCG TGCCGCCGAA GCCGCGCACG TTCTAA
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Protein sequence | MAAIKTSLPR RKFDVVIVGA GGSGLRAALQ LSRAGLSVGV LSKVFPTRSH TVAAQGGIGA SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPNV VYELEHFGMP FDRNADGTIY QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVE AKTQFFVEWM ALDLIRDADG DVLGVTALEM ETGDVYIMEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARSGIALQD MEFWQFHPTG VAGAGVLITE GVRGEGGILR NANGERFMER YAPTLKDLAP RDFVSRSMDQ EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDAIKEP IPVVPTIHYQ MGGIPTNIHG QVVGTSRDHK EPVNGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN HIVEHVKNQK EHKPLPADAG EFSLARLAKL EKSSSGEYTQ DVANDIRATM QKHAGVFRTS ALLKEGVAQM ADLKARVENI HLKDKSKVFN TARVEALELE NLIEVARATM VSAEARKESR GAHAHSDYEH RDDDNWLRHT LWYSEGDRLD YKPVQMKPLT VESVPPKPRT F
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