Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3572 |
Symbol | truA |
ID | 6126406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 455390 |
End bp | 456202 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641650679 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001777214 |
Protein GI | 170735954 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00438278 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCG CGCTGGGCAT CCAGTACGAC GGCGCGGCGT TCTGCGGCTG GCAGGCGCAG CCGCACGGCA AGACCGTGCA GGATCGGCTC GAACATGCGC TGGCCGAATT CGCGCGGGTG CCGCTGCACA CGACGGTGGC GGGGCGCACC GACACCGGCG TGCACGGGCT CGGACAAGTC GTGCATTTCG ACACCGATCT CGAGCGGGAG GTGTTCTCGT GGGTGCGCGG CACCAATGCG TTCCTGCCGT CGACCGTGTC GGTGCAATGG GCGAAGCCGA TGCCGGATAC GTTCCATGCG CGTTTCTCGG CGTTCGAGCG CACCTACTAC TACGCGCTGT ACGTGCATCC GGTACGTTCG CCGATGCTGG CCGGGCGCGC CGGCTGGATC CACACGCCGC TCGACGACGA CGCGATGCGC GCCGCCGCCG CGCACCTGAT CGGCGAGCAC GACTTTTCGT CGTTCCGGTC GTCGGAATGC CAGTCGAAGA CGCCGGTCAA ACACCTGTAT CAGATCGATG TGCGGCGCGC GGGGCATTTC ATCCATTTCC GCTTCCGCGC GAACGCGTTC CTGCATCACA TGGTGCGCAA CCTGATGGGC TGCCTCGTCG CGGTCGGGCG CGGCCGCTAT CCGGCCGACT GGCTCGCCGA CGTGCTGGCC GGGCGTGACC GCAATCTCGC GGCGCCCACG TTTATGGCCG ACGGGCTGTA CCTCGCCCAC GTCGGCTATC CGGCGGAATT CGCCGTCCCG CCCGCGCAGC TCGGCAGCGT ACCGTGGAGC AGCGTCTGGG CGGATCTGGA CCCACAAACA TGA
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Protein sequence | MRIALGIQYD GAAFCGWQAQ PHGKTVQDRL EHALAEFARV PLHTTVAGRT DTGVHGLGQV VHFDTDLERE VFSWVRGTNA FLPSTVSVQW AKPMPDTFHA RFSAFERTYY YALYVHPVRS PMLAGRAGWI HTPLDDDAMR AAAAHLIGEH DFSSFRSSEC QSKTPVKHLY QIDVRRAGHF IHFRFRANAF LHHMVRNLMG CLVAVGRGRY PADWLADVLA GRDRNLAAPT FMADGLYLAH VGYPAEFAVP PAQLGSVPWS SVWADLDPQT
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