Gene Bcenmc03_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3572 
SymboltruA 
ID6126406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp455390 
End bp456202 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID641650679 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_001777214 
Protein GI170735954 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00438278 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG CGCTGGGCAT CCAGTACGAC GGCGCGGCGT TCTGCGGCTG GCAGGCGCAG 
CCGCACGGCA AGACCGTGCA GGATCGGCTC GAACATGCGC TGGCCGAATT CGCGCGGGTG
CCGCTGCACA CGACGGTGGC GGGGCGCACC GACACCGGCG TGCACGGGCT CGGACAAGTC
GTGCATTTCG ACACCGATCT CGAGCGGGAG GTGTTCTCGT GGGTGCGCGG CACCAATGCG
TTCCTGCCGT CGACCGTGTC GGTGCAATGG GCGAAGCCGA TGCCGGATAC GTTCCATGCG
CGTTTCTCGG CGTTCGAGCG CACCTACTAC TACGCGCTGT ACGTGCATCC GGTACGTTCG
CCGATGCTGG CCGGGCGCGC CGGCTGGATC CACACGCCGC TCGACGACGA CGCGATGCGC
GCCGCCGCCG CGCACCTGAT CGGCGAGCAC GACTTTTCGT CGTTCCGGTC GTCGGAATGC
CAGTCGAAGA CGCCGGTCAA ACACCTGTAT CAGATCGATG TGCGGCGCGC GGGGCATTTC
ATCCATTTCC GCTTCCGCGC GAACGCGTTC CTGCATCACA TGGTGCGCAA CCTGATGGGC
TGCCTCGTCG CGGTCGGGCG CGGCCGCTAT CCGGCCGACT GGCTCGCCGA CGTGCTGGCC
GGGCGTGACC GCAATCTCGC GGCGCCCACG TTTATGGCCG ACGGGCTGTA CCTCGCCCAC
GTCGGCTATC CGGCGGAATT CGCCGTCCCG CCCGCGCAGC TCGGCAGCGT ACCGTGGAGC
AGCGTCTGGG CGGATCTGGA CCCACAAACA TGA
 
Protein sequence
MRIALGIQYD GAAFCGWQAQ PHGKTVQDRL EHALAEFARV PLHTTVAGRT DTGVHGLGQV 
VHFDTDLERE VFSWVRGTNA FLPSTVSVQW AKPMPDTFHA RFSAFERTYY YALYVHPVRS
PMLAGRAGWI HTPLDDDAMR AAAAHLIGEH DFSSFRSSEC QSKTPVKHLY QIDVRRAGHF
IHFRFRANAF LHHMVRNLMG CLVAVGRGRY PADWLADVLA GRDRNLAAPT FMADGLYLAH
VGYPAEFAVP PAQLGSVPWS SVWADLDPQT