Gene Bcenmc03_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3570 
Symbol 
ID6126404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp453444 
End bp454637 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content66% 
IMG OID641650677 
Producttryptophan synthase subunit beta 
Protein accessionYP_001777212 
Protein GI170735952 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.266435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACC TTCCTGATGA TCGCGGCCAT TTCGGCCCGT ATGGCGGCGT GTTCGTCGCC 
GAGACGCTGA TTCACGCGCT GGACGAACTG CGCGCGGCGT ATGAAAAGTT CCAGAACGAT
CCCGACTTCG TCGCCGAATT CGAGCGCGAG CTGAAGTATT TCGTCGGCCG CCCGTCGCCG
ATCTATCACG CGCAGCGCTG GAGCGAGATG CTCGGCGGCG CGCAGATCTA CCTGAAGCGC
GAAGACCTGA ACCACACGGG TGCGCACAAG ATCAACAACG TGATCGGCCA GGCGCTGCTC
GCGAAGCGCA TGGGCAAGAA GCGCGTGATC GCGGAAACGG GCGCCGGCCA GCACGGCGTC
GCGACCGCGA CGATCTGCGC GCGCTTCGGG ATGGAGTGCG TCGTCTACAT GGGCTCGGAG
GACGTGCGCC GGCAGGCCGC GAACGTCTAC CGGATGAAGC TGCTGGGCGC GACCGTCGTG
CCGGTCGAAT CGGGTTCGCG CACGCTGAAG GACGCGCTGA ACGAAGCGAT GCGCGACTGG
GTCACGAATA TCGAAAGCAC GTTCTACATC ATCGGCACGG TCGCGGGCCC GCACCCGTAC
CCGATGATGG TGCGCGACTT CCAGCGCGTG ATCGGTGACG AGTGCAAGGT GCAGATGCCC
GAGCTCGCCG GCCGCCAGCC GGACGCGGTG ATCGCGTGCG TCGGCGGCGG GTCGAACGCG
ATGGGCATCT TCTATCCGTA CATCGACGAT ACCTCGGTGC AACTGATCGG CGTCGAAGCG
GCCGGCGACG GCCTCGACAC GGGCCATCAC GCTGCCTCGC TGATCGCCGG CAGCCCCGGC
GTGCTGCACG GCAACCGCAC GTACCTGCTG CAGGACGACA ACGGCCAGAT CATCGAGACG
CATTCGGTGT CGGCGGGCCT CGATTATCCG GGCGTCGGTC CCGAGCACGC ATGGCTGAAG
GACAGCGGCC GCGCGCAGTA CGTGCCGATC ACCGACGCGG AAGCGTTGAA GGCGTTTCAC
GACTGCTGCC GGATCGAGGG GATCATTCCC GCGCTCGAGT CGAGCCACGC GATCGCGTAC
GGCGTGAAGC TCGCGCCGAC GTTGCCGAAG GACAAGCTCC TGCTCGTCAA CCTGTCGGGC
CGCGGCGACA AGGACATGCA CACGGTCGCC GAGCGATCGG GCATCGAGCT CTGA
 
Protein sequence
MYNLPDDRGH FGPYGGVFVA ETLIHALDEL RAAYEKFQND PDFVAEFERE LKYFVGRPSP 
IYHAQRWSEM LGGAQIYLKR EDLNHTGAHK INNVIGQALL AKRMGKKRVI AETGAGQHGV
ATATICARFG MECVVYMGSE DVRRQAANVY RMKLLGATVV PVESGSRTLK DALNEAMRDW
VTNIESTFYI IGTVAGPHPY PMMVRDFQRV IGDECKVQMP ELAGRQPDAV IACVGGGSNA
MGIFYPYIDD TSVQLIGVEA AGDGLDTGHH AASLIAGSPG VLHGNRTYLL QDDNGQIIET
HSVSAGLDYP GVGPEHAWLK DSGRAQYVPI TDAEALKAFH DCCRIEGIIP ALESSHAIAY
GVKLAPTLPK DKLLLVNLSG RGDKDMHTVA ERSGIEL