Gene Bcenmc03_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3546 
Symbol 
ID6126380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp423327 
End bp424253 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID641650653 
Productribonuclease BN 
Protein accessionYP_001777188 
Protein GI170735928 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0229297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC AGATCACTTC CGAAGCCACC CGTCTCGCCC AGCAGCAGGC CAACTGGGCC 
CTCACCGCAT TCAAGCGCTT CTCGTCCGAC CGCTGCTCCG CGATGGCCGC GGGCATCGCG
TTTTTCTCCG CGTTCTCGCT CGCGCCGACC CTCGTGATGG TGATCGCGGT GGCCGGCTGG
TTCTACGGCG ACGACGCCGC ACGCGGCCAG GTGTTCGAAC AGGCGCACCA GCTGATCGGC
GACGACGCGG CGGCCAGCAT CCAGACGATC GTGCAGAACG CGCACCGCGC GGGCGAGCGC
GGCGGCCTCG CCACGCTGAT CTCGTTCGCC GCGCTGGCGA TCGGCGCGTC GGCCACGTTC
GCGTCGCTCA GCGCCGCGCT CAGCGTGATC TGGCCGGCCA CCGAAAGCCG CTGGTCGAGC
ATGCTCGGGC TGGTGCGGGT GCGGCTGATC TCGTTCGGGC TCGTGCTCGG CGTCGCGTTC
CTGCTGATCG TGTCGCTCGT GCTCGACACC GCGATCACCT TCATCGGCAC CTGGCTGCTG
GGCGATTCGC CGTACGTGGT CGTCACGAAC CTCGTGCAGT TCTTCGTCGG CATCGCGGTG
CTCGCCGCCG CGTTCGCGTC GTTGATGAAA TTCCTGCCCG ATGCGCGCGT CGCGTGGCGC
GACGCCGCGA TCGGCGGCAT CGTGTCCGCG ATCCTGTTCT CCGGCGGCAA GAAGCTGTTC
GCGCTGTATC TCGCGCACGC GGGCACCGCG AGTGCGTTCG GCGCGGCCGG ATCGTTCGCG
GTCCTGCTGA TGTGGCTGTA CTTCTCCGCG ATCGTGCTGC TGCTCGGCGC GGAGTTCGCG
GCGGCCCGCG GCAACGCGCA TCGGCCGGCC GCGCCGGCTC CAGCCGCTCG ACCCGGTCAC
GCCGACGATC GCCCGCGCGA CGACTGA
 
Protein sequence
MKRQITSEAT RLAQQQANWA LTAFKRFSSD RCSAMAAGIA FFSAFSLAPT LVMVIAVAGW 
FYGDDAARGQ VFEQAHQLIG DDAAASIQTI VQNAHRAGER GGLATLISFA ALAIGASATF
ASLSAALSVI WPATESRWSS MLGLVRVRLI SFGLVLGVAF LLIVSLVLDT AITFIGTWLL
GDSPYVVVTN LVQFFVGIAV LAAAFASLMK FLPDARVAWR DAAIGGIVSA ILFSGGKKLF
ALYLAHAGTA SAFGAAGSFA VLLMWLYFSA IVLLLGAEFA AARGNAHRPA APAPAARPGH
ADDRPRDD