| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3544 |
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| Symbol | |
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| ID | 6126378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 420113 |
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| End bp | 422545 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641650651 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001777186 |
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| Protein GI | 170735926 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.287091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC ATTGGGTCGA CATCAAGAAC GCGGACGTGA TTCTCGTGAT GGGCGGCAAT
GCAGCCGAGG CCCATCCGTG CGGTTTCAAG TGGGTAACGG AGGCGAAGGC GCACCGCAAG
GCGCGGCTGA TCGTCGTCGA CCCGCGCTTC ACGCGTACGG CCTCGGTGGC CGATTATTAC
GCGCCGATCC GCACCGGCAC CGACATCGTC TTCCTGGGCG GCGTCATCAA CTATCTGCTG
ACGAACGACA AGATCCAGCA TGAGTACGTG AAGAACTACA CGGACTTCTC GTTCATCGTG
CGCGAGGATT TCGCGTTCAA CGACGGCATC TATTCCGGCT ACGACGCCGA GAAGCACGCG
TACCCGGACA AATCGAGCTG GGACTACGAG CGCGGCGACG ACGGTTTCGC GAAGGTCGAT
CCGACACTGC AGCATCCGCG TTGTGTATAC AACCTGCTGA AGCAGCACTA CGCGCGCTAT
ACGGCGGAGA TGGTCCAGCA GGTCTGCGGC ACGCCGAAGG AGAAATTCCT GAAGGTGTGC
GAGATGCTCG CGACCACGGC CGTGCCCGGC CGCGCCGGCA CGGTGCTGTA CGCGCTCGGC
TGGACCCACC ACTCGATCGG CGCGCAGATC ATCCGCACCG GCGCGATGGT GCAGTTGCTG
CTCGGCAACA TCGGCATCGC CGGCGGCGGG ATGAACGCGC TGCGCGGCCA CTCGAACATC
CAGGGGCTGA CCGACCTCGG GCTGATGTCG AACCTGCTGC CGGGCTACAT GACGCTGCCG
ATGCAGGCCG AGCAGGATTT CGACGCGTAC ATCAAGAAGC GCGTGCAGCA GCCGCTGCGG
CCGAACCAGT TGAGCTACTG GAAGAACTAC AAGGCGTTCC ACGTCAGCTT CATGAAGTCG
TGGTGGGGCG ACGCGGCCAC CGCGGAGAAC AACTGGGCCT ACGACTACCT GCCGAAGCTG
GACAAGCAGT ACGACCTGCT GCAGGCGATC GAGCTGATGA ATGCCGGCAA GATGAACGGC
TACATCTGCC AGGGCTTCAA CCCGCTCGCG GCGGCGCCGT CGAAGGTGAA GACGGCGGCG
GGCCTCGCGA AGCTGAAATG GCTCGTGATC ATGGATCCGC TCGCGACCGA GACGTCCGAG
TTCTGGAAGC ACCACGGCGA CTACAACGAC GTCGATGCGT CGAAGATCCA GACCGAGGTG
TTCCGTCTGC CGACCACCTG CTTCGCGGAG GAAAACGGCT CGCTCGTGAG TTCGAGCCGC
GTGCTGCAGT GGCACTGGAA GGGCGCGGAG CCGCCGGGCG AAGCGAGGAG CGACCTCGAG
ATCATGTCGG GGCTGTTCCT GCGCATGCGC AAGCTGTACC AGAAGGACGG CGGCAAGTAT
CCGGACCCGA TCGTGAACCT GACCTGGCCG TACGCGAACC CGGAGAGCCC GACGCCCGAG
GAACTGGCGA TGGAGTTCAA CGGGAAAGCG CTCGCCGATC TGCCCGATCC GAAGGACCCG
GCGAAGACGC TCGTGAAGAA GGGCGAGCAG CTCGCCGCGT TCGCGCAACT GAAGGACGAC
GGCACGACCG CGAGCGGCTG CTGGATCTTC TGCGGCGCAT GGACCCAGGC CGGCAACCAG
ATGGGGCGGC GCGACAACTC CGATCCGACC GGCATCGGCC AGACGCTGAA CTGGGCGTGG
GCGTGGCCGG CGAACCGGCG CATCCTGTAC AACCGCGCGT CGTGCGACGT CGCCGGCAAG
CCGTTCGACC CGACCCGCAA GCTGATCGGC TGGAACGGCA GCGCGTGGAA GGGCGCCGAC
GTGCCGGACT TCAAGGCGGA CGAACCGCCC GAAAACGGGA TGGGGCCGTT CATCATGAAT
CCGGAAGGCG TCGCGCGCTT CTTCGCCCGC GCGGGGATGA ACGAAGGTCC GTTCCCCGAG
CACTACGAGC CGTTCGAGAC GCCGCTCGGC GCGAACCCGT TGCACCCGAA CAACCCGCTG
GCGCTGAACA ACCCGGCCGC CCGCGTGTTC CCGGACGACC GCGCGTCGTT CGGCAAGGTG
GCGGACTTCC CGCACGTGGC GACCACGTAC CGGCTGACCG AGCATTTCCA CTACTGGACC
AAGCATGCGC GGCTGAACGC GATCATCCAG CCCGAGCAAT TCGTCGAGAT CGGCGAAGAC
CTCGCGAAGG AGGTCGGCGT CGCGCATGGC GAGCGCGTGA AGGTGTCGTC CAAGCGCGGC
TACATCATCG CGGTCGCCCT CGTCACGAAG CGGATCAAGC CGCTGACGGT CGACGGCAAG
AAGGTCCAGA CGGTCGGCGT CCCGTTGCAC TGGGGCTTCA AGGGTCTGAC GAAGCCCGGC
TATCTCGCCA ATACCCTGAC TCCGTCCGTG GGTGACGGCA ACTCCTATAC ACCGGAATTC
AAGTCGTTCC TGGTGAAGGT CGAAAAGGCG TAA
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| Protein sequence | MTNHWVDIKN ADVILVMGGN AAEAHPCGFK WVTEAKAHRK ARLIVVDPRF TRTASVADYY
APIRTGTDIV FLGGVINYLL TNDKIQHEYV KNYTDFSFIV REDFAFNDGI YSGYDAEKHA
YPDKSSWDYE RGDDGFAKVD PTLQHPRCVY NLLKQHYARY TAEMVQQVCG TPKEKFLKVC
EMLATTAVPG RAGTVLYALG WTHHSIGAQI IRTGAMVQLL LGNIGIAGGG MNALRGHSNI
QGLTDLGLMS NLLPGYMTLP MQAEQDFDAY IKKRVQQPLR PNQLSYWKNY KAFHVSFMKS
WWGDAATAEN NWAYDYLPKL DKQYDLLQAI ELMNAGKMNG YICQGFNPLA AAPSKVKTAA
GLAKLKWLVI MDPLATETSE FWKHHGDYND VDASKIQTEV FRLPTTCFAE ENGSLVSSSR
VLQWHWKGAE PPGEARSDLE IMSGLFLRMR KLYQKDGGKY PDPIVNLTWP YANPESPTPE
ELAMEFNGKA LADLPDPKDP AKTLVKKGEQ LAAFAQLKDD GTTASGCWIF CGAWTQAGNQ
MGRRDNSDPT GIGQTLNWAW AWPANRRILY NRASCDVAGK PFDPTRKLIG WNGSAWKGAD
VPDFKADEPP ENGMGPFIMN PEGVARFFAR AGMNEGPFPE HYEPFETPLG ANPLHPNNPL
ALNNPAARVF PDDRASFGKV ADFPHVATTY RLTEHFHYWT KHARLNAIIQ PEQFVEIGED
LAKEVGVAHG ERVKVSSKRG YIIAVALVTK RIKPLTVDGK KVQTVGVPLH WGFKGLTKPG
YLANTLTPSV GDGNSYTPEF KSFLVKVEKA
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