| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3519 |
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| Symbol | |
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| ID | 6126354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 395272 |
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| End bp | 395991 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641650627 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001777162 |
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| Protein GI | 170735902 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.12179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.661706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGA CTGAATCGAA TCGACGAAAC GCCCCCGCGA TCCTCCTCGT CGCGGCGTCG
CGCGGCCTCG GGCTGGCGAT GGCGGAGGCA TTCCTGAACA AGGGCTGGCA CGTGACGGGC
ACGGTGCGCG AAGGATCGGG GCGCACGAAG CTGCACGACC TGGCCGACCG GTTCGACGGC
CGGCTCGAAA TCGGCACGCT CGACATCTGC GAGCCCGCGC AACTGGCCGC GCTGCGCGCG
CGCCTGTCGG GCCGGCGCTT CGACATGCTG TTCGTGAATG CCGGCACGAC CAACGATCCG
AATGAAACGA TCGGCGAAGT GACGATCGAC GAATTCGTGC GCGTGATGAT CACGAATGCG
CTGGCGCCGA TGCGCGTGAT CGAGACGCTG CAGGATCTCG TGACCGACGA CGGGTTGATC
GGCGCAATGT CGTCGGGGCA GGGCAGCGTC GCGAACAACG TGACCGGAAT GCGCGAGGTG
TATCGCGGCA GCAAGGCCGC GCTGAACCAG TTCATGCGCA GCTTCGCGGC ACGTCAGGCC
GATACGCGCC GCGCGCTGGC GCTGATGGCG CCCGGCTGGG TCCGCACCGA ACTCGGCGGA
CCCGATGCAC GCCTGACCAT CGAGGAGAGT GTGCCGAGCC TCGTCGACGT GCTGTTGGCG
AAGCGGGCGC GGCCCGGGCT CGAATACCTC GACTATCTGG GCCGCACGGT GCCGTGGTAA
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| Protein sequence | MQSTESNRRN APAILLVAAS RGLGLAMAEA FLNKGWHVTG TVREGSGRTK LHDLADRFDG
RLEIGTLDIC EPAQLAALRA RLSGRRFDML FVNAGTTNDP NETIGEVTID EFVRVMITNA
LAPMRVIETL QDLVTDDGLI GAMSSGQGSV ANNVTGMREV YRGSKAALNQ FMRSFAARQA
DTRRALALMA PGWVRTELGG PDARLTIEES VPSLVDVLLA KRARPGLEYL DYLGRTVPW
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