| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3512 |
|---|
| Symbol | |
|---|
| ID | 6126347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 384768 |
|---|
| End bp | 385676 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641650620 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001777155 |
|---|
| Protein GI | 170735895 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00807403 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGT TGGCGACGAT GCGCATCTAC GTGAGAGTCG TGGAGCGCGG CACGATGTCC
GGCGCGGCGC GGGATCTCGA CATGGGCCAA CCGGCCGTCA GCGAGCGCAT CGAGAAGCTC
GAAAAGCATC TCGGCACGCG GCTGCTGATG CGCAGTGCAC GCACCCTCGC GTGCACGGAG
GAAGGCCGGA TTTTCTACGA ACGCAGCAAG GCGCTGCTCG AAGCGGCCGA ACTGGCCGTT
GCGTCGGTAT CGAAGACGGC GCATGCGCTC GACGGCACGA TCCGGCTCGC GGCGCCGCAA
TGTTTCGGCG AGGTCGTGCT GCCGGGCGTG CTGATGCAGA TCCGCACCGC GTATCCGAAG
CTGCACATCG ACCTCGTGCT GAACGACGAT ATCGTCGATC CGGTCACCGA GGGCGTCGAC
ATTTCGATCC GGGTCGGCCA GCTCGGCGAC GGCGGATTCG TCGCGTACGC ACTCGGCGCG
GTCGGCCGCG TGCTCGTCGC CGCGCCGTCG TATCTCGACC GGCACGGCCC GCTCGACACG
AAGGCCGATC TCGCGAACCA TCCGTTCATC CGCGTGAAAG GCGTGTTCGC GAACGAACAG
GTGCCGCTGC GGCACGACGG CGGTGCGGTC GAATACGCGC GCATCCGCAC CGTCATGACC
GCGAGCCACT GGCGCCCGAT GTTCGACACG ATCGCGGCGG GCGGCGGCAT CGGCGTGGTC
CAGCACCCGG CTTGCACCGA TGCGCTCGCG CACGGCCGGC TCGTCCGCCT GCTGCCGCAC
TACGACGTCC CCGACTTCGC GCTCAACGTG CTGGTACACG CGCAGCGGCC GCTGCCGCCG
CGCGTGCGAG CCGTCGTCGA TCTGCTGAAA AGCGAACTCC CGCCGCTGCT GACGCAAGGT
CAGCGCTAG
|
|---|
| Protein sequence | MDLLATMRIY VRVVERGTMS GAARDLDMGQ PAVSERIEKL EKHLGTRLLM RSARTLACTE
EGRIFYERSK ALLEAAELAV ASVSKTAHAL DGTIRLAAPQ CFGEVVLPGV LMQIRTAYPK
LHIDLVLNDD IVDPVTEGVD ISIRVGQLGD GGFVAYALGA VGRVLVAAPS YLDRHGPLDT
KADLANHPFI RVKGVFANEQ VPLRHDGGAV EYARIRTVMT ASHWRPMFDT IAAGGGIGVV
QHPACTDALA HGRLVRLLPH YDVPDFALNV LVHAQRPLPP RVRAVVDLLK SELPPLLTQG
QR
|
|---|
| |