Gene Bcenmc03_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3490 
Symbol 
ID6126325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp362235 
End bp363542 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID641650598 
Productmajor facilitator transporter 
Protein accessionYP_001777133 
Protein GI170735873 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000252104 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTACCG CACACCCGAG CGCCGCCGTT TCCCCCGACG ACGCGCCCCA CGGCCCTCTC 
TATCGCAAGG TCACGCTGCG CCTCATCACC CTCTTCTGCC TGTGTTACTT CGCGGCCTAT
CTCGACCGCA TCAACATCGG TCTCGCAAAG CTCCAGATGC TCGATGCGCT GAAGTTCAGC
GACACCGTGT ACGGCCTCGG CGCCGGGCTG TTCTTCGCCG GCTACATCCT GTTCGAAGTC
CCAAGCAATC TGGTGCTGCA ACGCGTCGGC GCGAAGCTGT GGATCGCGCG GATCATGATC
ACGTGGGGCC TGCTGTCGGG CGCGACGATG TTCGTGCACA CGCCGATGCA GTTCTACGTC
GTGCGCTTCC TGCTCGGCGC CGCCGAAGCC GGTTTCCTGC CGGGCGTGCT GCTGTACCTG
ACGCAGTGGT ATCCCGATGC ACGTCGCGCA CGGATCGTCG CGCTGTTCAT GGTGGGCCTG
CCGCTGTCGA GCATGATCGG CAGCCCGATT TCCGGCTGGA TCATGCGTGC GTTCGACGGC
GCGCACGGGC TCGGCGGCTG GCAGTGGCTG TTCCTGCTCG AAGCGCTGCC GTCGGTGCTG
CTCGGCTTCG CGGTGCTGCG CTGGCTGCCG AACGGCATCG AATCCACGCG CTGGCTGAAC
GCCGACGAGA AGCGGGTGCT GCGCGCGAAT CTCGACGCCG ATCCGTCCGG CAACAAGAGC
CACGCGCTCG GCAAGGCGTT CTCCGATCCG AAGGTGTGGG CGCTCGGCCT GATCGACCTG
TGCGTGCTGC TCGGCCTGTA TGCGGTGAGC TTCTGGCTGC CGACGATCCT GCGCGACACC
GGCGTGAAGG ACGCATATCA GATCGGCTGG CTGATGGTGA TCCCGAACGC CGCCGCCGTG
CTCGCGACGC TGTACTGCGG CGCCAGCTCC GACCGCGCAC GCGAACGCCG CTGGCATATC
GTCGTGCCGT TCATGGTGTC GGCCGTCGCG CTGGCGATCG CGGCTTCGTC GTCGCACGGC
ACGCTCGGCA CAGTGCTGCT GTTCTCGCTG ATCAACGCCG GCGCGGCCGC CGCGATGCCG
GTCGTGTGGG CGCTGCCGTC GACGTTCCTG AAGGGCTCGG CCGCCGCCGG CGGCATCGCG
TTCGCATGCT CGATCGCAAA CCTCGGCGGG TTCGGCAGCA CCTATTTCAT CGGCTGGCTG
CGCGATACGT TCCATTCGCA GAGCGCGGGT CTGTATGGTT TCGCCGCGTG CATGCTGGTC
GGCTGCGCAC TCGCGCTCGC GTACCCGGCC CGGCTCGTGA ACCGCTGA
 
Protein sequence
MSTAHPSAAV SPDDAPHGPL YRKVTLRLIT LFCLCYFAAY LDRINIGLAK LQMLDALKFS 
DTVYGLGAGL FFAGYILFEV PSNLVLQRVG AKLWIARIMI TWGLLSGATM FVHTPMQFYV
VRFLLGAAEA GFLPGVLLYL TQWYPDARRA RIVALFMVGL PLSSMIGSPI SGWIMRAFDG
AHGLGGWQWL FLLEALPSVL LGFAVLRWLP NGIESTRWLN ADEKRVLRAN LDADPSGNKS
HALGKAFSDP KVWALGLIDL CVLLGLYAVS FWLPTILRDT GVKDAYQIGW LMVIPNAAAV
LATLYCGASS DRARERRWHI VVPFMVSAVA LAIAASSSHG TLGTVLLFSL INAGAAAAMP
VVWALPSTFL KGSAAAGGIA FACSIANLGG FGSTYFIGWL RDTFHSQSAG LYGFAACMLV
GCALALAYPA RLVNR