| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3471 |
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| Symbol | |
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| ID | 6126306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 338924 |
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| End bp | 341173 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641650579 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001777114 |
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| Protein GI | 170735854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.291748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATACCG AACCGCAAAG TTCTCGCTAC AGCCTCGGGC TCGCCGCGGA AGTGCTCGCA
TCCGAGCAGA GCGTACTGAG GCTGATCACG CGCAACACGC CACTGCCGGA ACTGTTGGTC
GAGGTTTGCC GGCGTGCCGA GGCTTTGCTC GGCGACGGCG CGTGCTGCAC GATCCTGCTG
CTCGATACGG ACGGCGTGCA CGTGCGCGTC GGCGCGGCGC CGTCGTTGCC CGCGCAGTAC
AGCGCGGCGA TCGACGGCGC GACGATCGGG CCCGCGGCCG GCTCGTGCGG CACGGCGATG
TACGAGCGCC GGATGATCGC CGTCGAAGAC ATCGAAACCG ATCCACTGTG GGCCGACTAC
CGTGCCATCG CGTTGCCGCT GGGCTTGCGC GCGTGCTGGT CGGTGCCGTT CCTCGACGAG
GCGGGCGCCG TGCTCGGCGC GTTCGCCGTC TATCACCACC GGCCGTGCCG GCCGAGCGAC
GAGGAAACCG CGCTGTTGCG CGATATCGGC AACAGCGTCG GCCTCGCGGT GCACCAGGAC
CGGATCGCAC GACAACTCGC GCGCAGCGAG GAACATCACC GGCTCGTCGT CAACAGCCTG
AGCGAGGGCA TCCTCGTCAT ATCGCGCGAA GGCATCGTGA TCGCGAGCAA TCCGAGCGCG
AACCGGATGA TGCGCGTGAA GGGCGAACTC GTCGGCCGCC GGCTGTCGAC GGTGATCCTG
CGCAAGCTGC GCGAGGACGG CACGCCGATC GACCCGCACG ACTGGCCGAG CCGGCGCGCG
CTCGAGACGG CCACGCCGAT GCTCGACTAT ACGGTCGGCT TCGGTCTCGC GGATGGCGAC
ATCATCTGGG TGCGCGGCAA CGCGGTGCCG ATCGTGAGGC CGGGCGAGAC GCAGGCCGAC
TCGGTGCTCG TGTCGTTCAA CGACATCGGC CCCGTGCGCG AAGCGCAGCA GCAGTTGCGC
TACATGGCGA CCCGCGACGC GCTGACGGGC CTCTACAACC GCCGCTGGCT CGGTGACCGC
ATGCGCGAGC TGTTCTGCGT GCGCGATGCG GCGGCCGGGC CCGCGCGCGT CGCGATCCTG
TTCATCGATC TGGTCGGCTT CAAGAAGGTC AACGACACGG CCGGCCACGA CGCCGGCGAC
GCGCTGCTGC GCAGCGTCGC CGCGCGGCTC GCGGCCTGCG GGGAGGGCCG CTATGCGCTC
ACGCGCGTCG GCGGCGACGA GTTCGTGATC CTCGTCGACG ACTGCGACGA TCCCGATCGC
CTGTCGGTGC TCGCACGCGA GGTGATCGAG GCGATCGCGA AGCCGTTCGC GATCGCGAAC
AACGAATACT GGCTCGGCGT ATCGATCGGC ATCAGCGTCG CGCCGCGCGA CGGCGACGAT
GCCGCGACGC TGATGCGCAA CGCCGATTCG GCGATGTACG ACGCGAAGCA GCGCGGCCGC
AACCACTTCA CGTTCTTCAC CGCGCAGCTC AACCTGCGGC TGCAGCGCCG CTTCGCGATC
GAGCAGTCGC TGCGGCGCGC GCTCGCGTCG GACCTGCTGC GGCTCGCGTA TCAACCCGTC
GTCGATGCGC GCAGCGGCCG CACGGTCGGC GCCGAGGCGC TGCTGCGCTG GACGAGCCCC
GAGCTCGGGC CGATGTCGCC GGCGGAATTC ATTCCGGTCG CGGAAGATAC CGGGCTGATC
GTCGCGATCG GCCAGTGGGT GCTCGAAACC GCGTGCCGGC AGGTGGCCGA GTGGCGCCGC
ACGATCGCGC CGGACCTGAT GCTGGCCGTC AACCTGTCGC CGCGGCAGTT TCACGAGGGG
CTCGTCGAAT CGGTCGGCCG CTGTCTCGCG CAGACGCGGC TCGACCCGTC GGCGCTCGAA
CTGGAGATCA CCGAAGGCGT GCTGATGAAC GACACGGACA CCGTGCTGCC GATGCTCGAG
GCGCTCACGG ACATGAACGT GCGGATCTCG GTCGACGATT TCGGCACCGG CTATTCGTCG
CTCGCGTACC TGAAGCGCTT TCCGCTGCAC AACCTGAAGG TCGACCGCTC GTTCGTTTCG
GGCGTGCCCG ATCATCACGA CTCGGTCGCG ATCACGCAGG CGGTCGTCGC GATGGCGCAT
TCGCTCGGGA TGAAGGTCAC GGCCGAAGGC GTCGAGACGC AGGCGCAGTC GTGGTTTCTG
CAGCAGATCG GCTGCGACAT GCAGCAGGGC TATCTGTTCA GCCGGCCGCT GGACGCGAGC
GATTACGCGC GCCGGCTCGG CGCCGCGTAA
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| Protein sequence | MNTEPQSSRY SLGLAAEVLA SEQSVLRLIT RNTPLPELLV EVCRRAEALL GDGACCTILL
LDTDGVHVRV GAAPSLPAQY SAAIDGATIG PAAGSCGTAM YERRMIAVED IETDPLWADY
RAIALPLGLR ACWSVPFLDE AGAVLGAFAV YHHRPCRPSD EETALLRDIG NSVGLAVHQD
RIARQLARSE EHHRLVVNSL SEGILVISRE GIVIASNPSA NRMMRVKGEL VGRRLSTVIL
RKLREDGTPI DPHDWPSRRA LETATPMLDY TVGFGLADGD IIWVRGNAVP IVRPGETQAD
SVLVSFNDIG PVREAQQQLR YMATRDALTG LYNRRWLGDR MRELFCVRDA AAGPARVAIL
FIDLVGFKKV NDTAGHDAGD ALLRSVAARL AACGEGRYAL TRVGGDEFVI LVDDCDDPDR
LSVLAREVIE AIAKPFAIAN NEYWLGVSIG ISVAPRDGDD AATLMRNADS AMYDAKQRGR
NHFTFFTAQL NLRLQRRFAI EQSLRRALAS DLLRLAYQPV VDARSGRTVG AEALLRWTSP
ELGPMSPAEF IPVAEDTGLI VAIGQWVLET ACRQVAEWRR TIAPDLMLAV NLSPRQFHEG
LVESVGRCLA QTRLDPSALE LEITEGVLMN DTDTVLPMLE ALTDMNVRIS VDDFGTGYSS
LAYLKRFPLH NLKVDRSFVS GVPDHHDSVA ITQAVVAMAH SLGMKVTAEG VETQAQSWFL
QQIGCDMQQG YLFSRPLDAS DYARRLGAA
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