Gene Bcenmc03_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3406 
Symbol 
ID6128823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp261037 
End bp262434 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content57% 
IMG OID641650514 
Productintegrase catalytic region 
Protein accessionYP_001777049 
Protein GI170735789 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGAA TTGCAGAATG GGTGTATCAG ATAACCGGTC GAGGAGCGAT GCACTCGCCA 
GGTGCGCCGT CGCTTCGGCA TGAGATTGAG CGTCGATTTT GGAAGCAGAT CGCCACCGGT
GTTACGAGTG AGAGAGCCGC AGAGGCGGTT GGCGTGTCCT CCGCGGTGGG CTCGCGCTGG
TTCCGTTATC GTGGCGGTAT GCCACTTTTC ATGTCGAAAC CTATATCTGG TAGGTACTTG
TCGTTCGCCG AGCGTGAAGA GATCGGGTTG CTCTCGGCCC AAAACATAGG GGTGCGCGAG
ATTGCTCGCC GAATCGGACG TAGCCCGTCA ACCATTTCGC GCGAACTTAC GCGTAACGCA
GCGACCCGTG GTGGCCGCCT CGAGTATCGT GCTTCGGTCG CACAATGGAA GGCAGAGCAC
TTTGCCAAGC GACCCAAACC AGCGAAACTG GCGACTAACC AGCGACTGCA TCATTATGTG
CAGGAGCGCT TGGAAGGCAA GGTGTGTGAC GCTGATGGCC GTAAGATTGC CGGACCCCAG
CAGGCACCGT TCAAGGGGCG GAATAAACCG CATCGCGGAG ACCGAAAGTG GGTCAATGGT
TGGTCGCCGG AACAGATCGC CAACCGCCTA CGGATCGATT TCCCTGATGA TGAATCCATG
CGCATTTCTC ACGAAGCCAT TTACCAGGCT CTTTACATTC AAGGACGTGG CGCGCTCAAG
CGCGAGCTTG TGGGTTGTCT GCGCACCGGA CGCGCGTTGC GCGTGCCAAG GGCCAGGGCG
CGAGCCAAAG CATGGGCACA CGTCAGCGAG GATGTGATGA TCTCCAGTCG CCCCGCAGAG
GTGGAAGATC GTGCTGTGCC GGGCCATTGG GAAGGCGACT TGCTCATTGG CCTAAATCGA
TCTGCTATTG GCACGCTGGT GGAGAGATCA TCCCGTTTCA CCATGCTCGT ACACTTGCCT
CGGGAGAAAG GTTACGGATT GATTCCCCGG ACAAAGAACG GCCCTGCGCT GGCTGGCTAC
GGAGCTGTCA CGATGGCCAA TGCGCTCAAG AAGACGGTGA CAGATATGCC GGCCCGGCTG
TGGCGATCAT TGACTTGGGA TCGCGGCAAG GAGCTGTCCG ATCATGCTCG CTTTACTGTC
GAGTCCGGCG TACAAGTATT TTTCGCCGAC CCGCACAGTC CATGGCAGCG TGGCACAAAC
GAGAATACGA ACGGTCTATT GCGACAATAC TTTCCAAAGG GCACAGACCT ATCCCGATGG
AGCGCACAAG AGATCCAAGC CGTTGCGCAT ACACTGAATA CTAGGCCTCG AAAGACGCTT
GGATGGAAGA CACCGGCAGA AGCTTTGAAC GAGCATCTAA AATCTGCTCA ACAATCTCGT
GTTGCGACGA CCGGTTGA
 
Protein sequence
MGRIAEWVYQ ITGRGAMHSP GAPSLRHEIE RRFWKQIATG VTSERAAEAV GVSSAVGSRW 
FRYRGGMPLF MSKPISGRYL SFAEREEIGL LSAQNIGVRE IARRIGRSPS TISRELTRNA
ATRGGRLEYR ASVAQWKAEH FAKRPKPAKL ATNQRLHHYV QERLEGKVCD ADGRKIAGPQ
QAPFKGRNKP HRGDRKWVNG WSPEQIANRL RIDFPDDESM RISHEAIYQA LYIQGRGALK
RELVGCLRTG RALRVPRARA RAKAWAHVSE DVMISSRPAE VEDRAVPGHW EGDLLIGLNR
SAIGTLVERS SRFTMLVHLP REKGYGLIPR TKNGPALAGY GAVTMANALK KTVTDMPARL
WRSLTWDRGK ELSDHARFTV ESGVQVFFAD PHSPWQRGTN ENTNGLLRQY FPKGTDLSRW
SAQEIQAVAH TLNTRPRKTL GWKTPAEALN EHLKSAQQSR VATTG