| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3399 |
|---|
| Symbol | |
|---|
| ID | 6126133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 253343 |
|---|
| End bp | 254539 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641650508 |
|---|
| Product | phosphonopyruvate decarboxylase |
|---|
| Protein accession | YP_001777043 |
|---|
| Protein GI | 170735783 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
|---|
| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAG CGGCCCAGTT CGTCGAAGCC GCGCGCCAAC GCGGCTTCGA CTGGTACGCG
GGCGTGCCCT GCTCGTACCT GACGCCGTTC ATCAATTACG TGTTGCAGGA CCCGACGCTG
CACTACGTGT CGGCCGCGAA CGAAGGCGAC GCGGTCGCGC TGATCGCGGG CGCGACGCTC
GGCGGCAAGC GCGGGATCGC GATGATGCAG AACTCGGGCC TCGGCAACGC GGTGAGCCCG
CTCACGTCGC TCACGTGGAC GTTCCGCCTG CCGCAGTTGC TGATCGTCAC GTGGCGCGGC
CAGCCGGGCG TGGCCGACGA GCCGCAGCAC GCGCTGATGG GCCCGATCAC GCCCGCAATG
CTCGATACGA TGGAGATCCC GTGGGAGACG TTCCCGACCG ACCCCGAGCA GGTCGGCCCG
GCACTCGACC GCGCGATCGC GCACATGGAC GAAACGGGCC GCCCGTACGC GCTCGTGATG
CAGAAAGGCA GCGTCGCGCC GTATGAGCTG AAGGCGAACC CGGCCGCGAC GCCGCGTGCG
CACGTCGCTG CGCAATCGGC GTCGCGTGCG GCGTCGGCCG ATGCGTGGCC GACCCGTCAC
GACGCGCTGC AGCGCGTGAT CGCGCATACG CCGGTCGATT CGACCGTCGT GCTCGCGTCG
ACCGGTTTCT GCGGTCGCGA GCTCTACGCG CTCGACGATC GCCCGAACCA GCTGTACATG
GTCGGCTCGA TGGGCTGCGT GACGCCGCTC GCGCTCGGCC TCGCGCTCGC GCGCCCCGAC
CTGCACGTGG TGGCCGTCGA CGGCGACGGC GCCGCGCTGA TGCGCATGGG CGTGTTCGCG
ACGCTCGGCA CTTACGGCCC GGCCAATCTC ACGCACGTGC TGCTCGACAA CGGCGCGCAC
GAATCGACAG GCGGCCAGGC GACGGTGTCG CAGCACGTGT CGTTCGCGGG TGTCGCGGCC
GCGTGCGGCT ACGCGTCGGC GGTCGACGGC GATACGCTCG ACGTGCTCGA TGCGACGCTT
TCCACGCAAG CTGACGGGGT CCAGCCATCC GGTGCGCAAT TCGTGCGCGT GGCGATCCGC
ACGGGCGTGC CCGACGGCCT GCCCCGCCCG ACCGTCACGC CGGTCGAGGT CAAGACCCGT
CTGATGCGGC ACATCGGCGC CGCGCAGACC GAAGCCCACG TTGAAGGAGC CCATTGA
|
|---|
| Protein sequence | MIEAAQFVEA ARQRGFDWYA GVPCSYLTPF INYVLQDPTL HYVSAANEGD AVALIAGATL
GGKRGIAMMQ NSGLGNAVSP LTSLTWTFRL PQLLIVTWRG QPGVADEPQH ALMGPITPAM
LDTMEIPWET FPTDPEQVGP ALDRAIAHMD ETGRPYALVM QKGSVAPYEL KANPAATPRA
HVAAQSASRA ASADAWPTRH DALQRVIAHT PVDSTVVLAS TGFCGRELYA LDDRPNQLYM
VGSMGCVTPL ALGLALARPD LHVVAVDGDG AALMRMGVFA TLGTYGPANL THVLLDNGAH
ESTGGQATVS QHVSFAGVAA ACGYASAVDG DTLDVLDATL STQADGVQPS GAQFVRVAIR
TGVPDGLPRP TVTPVEVKTR LMRHIGAAQT EAHVEGAH
|
|---|
| |