Gene Bcenmc03_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3380 
Symbol 
ID6126114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp230733 
End bp231653 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID641650489 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001777024 
Protein GI170735764 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.434141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.344387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCA AAGCCATTCA GTGGACCGGG GTTTTCCCGG CCGTCAGCAC CCAGTTCAAG 
CCGGACTTTT CCCTCGACAT CGACGCCACG CACCGCGTGG TCAAGAACCT GGTGAACGAC
GGCGTGTCGG GCCTCGTGGT CTGCGGCACG GTCGGCGAAA ACACGTCGCT GTCGACGAGC
GAGAAGCTCC AGGTGATCGA GGCCGCGCGC GACGCGGCCG GCGGCAAGAT TCCGGTGATC
GCCGGCATCG CCGAATTCAC GACCGAATTC GCGCGCAACA CGGTGCGTGA AGCGCAGCGC
GTCGGTGTCG ACGGCGTGAT GGTAATGCCC GCGCTCGTCT ACTCGGCGAA GCCGCACGAA
ACCGCCGCGC ACTTCCGCGC GGTCGCGACG AGCACCGACC TGCCGGTGAT GGTCTACAAC
AACCCGCCGA TCTACAAGAA CGACGTGACG CCCGACGTGC TGATCGCGCT GCAGGACTGC
GAGAACATCG TCTGCTTCAA GGATTCGTCG GGCGATACGC GCCGCTTCAT CGACCTGCGC
AACGCGGTCG GCGATCGCTT CGTGCTGTTC GCGGGCCTCG ACGACGTCGT GGTGGAGAGC
ATCGCGGTCG GCGCCGAAGG CTGGGTGTCG GGCATGTCGA ACGCGTTCCC GAAGGAAGGC
GAGACGCTGT TCCGCCTCGC GAAGCAAAAG CGCTTCGACG AAGCGCTCGC GCTGTATCGC
TGGTTCATGC CGCTGCTGCA CCTCGACGCA CGCCCCGACC TCGTGCAGTG CATCAAGCTG
TGCGAAGAGC TGGTCGGCCG GGGCAGCGCG ATCACGCGTC CGCCGCGCCT CGCGCTGCAA
GGCGACACGC TTGCGGAAGT GAAGGCCATC GTCGCGAAGG CGCTCGAAAC GCGCCCGACG
CTGCCCGACG TCGGTCTCTG A
 
Protein sequence
MSRKAIQWTG VFPAVSTQFK PDFSLDIDAT HRVVKNLVND GVSGLVVCGT VGENTSLSTS 
EKLQVIEAAR DAAGGKIPVI AGIAEFTTEF ARNTVREAQR VGVDGVMVMP ALVYSAKPHE
TAAHFRAVAT STDLPVMVYN NPPIYKNDVT PDVLIALQDC ENIVCFKDSS GDTRRFIDLR
NAVGDRFVLF AGLDDVVVES IAVGAEGWVS GMSNAFPKEG ETLFRLAKQK RFDEALALYR
WFMPLLHLDA RPDLVQCIKL CEELVGRGSA ITRPPRLALQ GDTLAEVKAI VAKALETRPT
LPDVGL