Gene Bcenmc03_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3370 
Symbol 
ID6126104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp220337 
End bp221698 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content71% 
IMG OID641650479 
Productmajor facilitator transporter 
Protein accessionYP_001777014 
Protein GI170735754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.278479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.891983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CGCTGTCCAT CGACGTCAGC GAATGGATCG ACCGGCATCG CATTGCGCCG 
TTTCAGGCCG CGATCGTCGT CCTGTGCTTT CTGATCGTCG CGATCGACGG ATTCGATACC
GCGTCGATCG GGTTCATCGC GCCGGTCATC CGCGCGGAAT GGGGCCTGTC GCCCGCGCAG
CTCGCGCCGG TATTCGGCGC GGGATTGGCC GGGCTGATGG CCGGCGCGCT CGTATTCGGG
CCGTTCGGTG ACCGGTTCGG CCGCAAGCGG CTGCTGCTCG TATGCGTGGC GTGCTTCGGC
ATCGCGAGCG CCGCGTCGGC GAGCGCGGGC GGCCTGACGG AGCTGATCGT GTGGCGCTTC
GTGACCGGGC TCGGGCTGGG CGGCGCGATG CCGAATGCGA TCACGCTGAC GTCCGAATAC
TGTCCGGCGC GACGCCGCTC GCTGCTCGTG ACGACGATGT TCTGCGGTTT CACGATCGGC
TCCGCGCTCG GCGGGCTCGC GGCCGCGTCG CTGATCGAGC ACCACGGCTG GCGCGCGGTG
CTGGTCGTCG GCGGCGTGGC GCCGCTGCTG CTCCTGCCGC TGCTCGCGTG GCGACTGCCG
GAATCGGTGC GCTATCTCGT CAACCAGGGC GCGCCGTCCG CGCGGATCGC GGCGCTGCTC
GGTCGTATTG CGCCGGGTCC GCACCTCGCG CATGCGTCGT TCATCGCGCC CGCCGGCAAG
CCCGCCGGGT CGCCGCTCGG GCGGCTGTTC GCCGCCGACC TGCTGCGCGG CACGCTGCTG
CTGTGGCTCA CGTTCTTCAT GAGCCTGCTC GTCATCTACC TGCTGTCCAG CTGGCTGCCG
ACGTTGCTGC GCGCGACCGG CGCGACGTTG CAGACGGCTG CACGCGTGAC CGCGATGTTC
CAGGTCGGCG GCACGCTCGG CGCGATCGTC CTTGGCTGGC TGATGGACCG CTTCGATCCG
CATCGCGTGC TGGCCTGCAG CTATGCGGCG GCCGGCGCCT GCGTCGCGAC GATCGGCGTA
TTCGCCGCGA CGCCATGGGG TGCGGCGCTC GCGGTGTTCG CCGCCGGCTT CTGCGTATCG
GGCTCGCAGG TCGGTGCGAA CGCGTTGTCG GCCGCGTTCT ATCCGACCGA GTGCCGGACG
ACCGGCGTGA GCTGGGCGAA CGGTATCGGG CGCGGCGGCT CGGTGGTCGG CTCGATGGCG
GGCGGCGCGA TGCTGGCGAT GGGCGTGCCG CTGTCGACCG CGTTCGCCGT CGTTGCCGCG
CCATGCGTGA TCGCAGCGGT TGCAGTGTTG GCGCTCGGCG TGGTTCGCGC CGGTGCGGTA
CGCGCGGCAA CCGCGGACGG GATGGCGGGC AGGCAGGCCT GA
 
Protein sequence
MADTLSIDVS EWIDRHRIAP FQAAIVVLCF LIVAIDGFDT ASIGFIAPVI RAEWGLSPAQ 
LAPVFGAGLA GLMAGALVFG PFGDRFGRKR LLLVCVACFG IASAASASAG GLTELIVWRF
VTGLGLGGAM PNAITLTSEY CPARRRSLLV TTMFCGFTIG SALGGLAAAS LIEHHGWRAV
LVVGGVAPLL LLPLLAWRLP ESVRYLVNQG APSARIAALL GRIAPGPHLA HASFIAPAGK
PAGSPLGRLF AADLLRGTLL LWLTFFMSLL VIYLLSSWLP TLLRATGATL QTAARVTAMF
QVGGTLGAIV LGWLMDRFDP HRVLACSYAA AGACVATIGV FAATPWGAAL AVFAAGFCVS
GSQVGANALS AAFYPTECRT TGVSWANGIG RGGSVVGSMA GGAMLAMGVP LSTAFAVVAA
PCVIAAVAVL ALGVVRAGAV RAATADGMAG RQA