| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3333 |
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| Symbol | |
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| ID | 6126068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 177514 |
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| End bp | 178830 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641650443 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001776978 |
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| Protein GI | 170735718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGT TCGCTGTAAC GATAGCCGGC GCGCCGGCAC ACGCCCGTGC GTTCTGCCTC
GATACCGCCT ACCAGTACGC GTCCGTGCAC GATCCGCGCT ACCTGCAGGC CCGCAGCGAA
TACGATGCGG CCCGCCAGAA ATTTCCCGAG GCGCGTGCGC AGATGCTGCC GCAGGCCGCC
GCGCAACTCG AGTGGGGGCG CTACGGCACG CACGCGAACC TGTTCGGCAT CGACGTCAGC
GGGTCGAGCA ACGCGGCATA CGGTTCCGCT CAGGTCACGC AGGCGCTGTT CAATGTGCCC
TACCTGTACG ACATGCGGCG CGCGACCGAG TACGAGGAAG CGGCGAAGCA GAAGCTCGAG
GTCGCGAAGC AGGACCTGAT CCTGCGGGTC GCGAACGCGT GCTTCGATCT GCTGAGCGCG
CGCGAGAAAC TGCAATCCGC CGACGACGAA GTCAGCGCGC TCACGCGACT CGAAAGCGAT
ACGCGGCGCA TGGCGCAACT CGGGATGAAG ACGATCGGCG ACACCGCCGA GATCGAGGCG
CGCCGCAGCC TCGCGCAATC CGACGAGGCG CTCGCGCAGA CCGACGTCGA TGCGCGGCGC
GCCCGCTACG AGACGTTGCT CGGTTCGACG ATCGATTTCT CGCGCTGGCC GCGGCTGGCG
ATGCGCGGGT CGTCGCCGCG CATTCCGTCC GGCGACTATG CGCCGCAGGA CAACCCCGCG
TACCGGCAGG CCTATCGCGA CGTCCAGGTC GCGCGCCTTG CCGCGAAGCG CGTCAGCGCC
GAACACTTGC CGACCGTCGA CCTGTTCGCG TCGTATTCGC GTGGGCTCAA CCCGAACCTG
CGCGGGCTCA CCGATCGTTC GGATTTCCAT CAAAGCGCGG TCGGCGTGCA GGTGACGATT
CCGATCTTCT CCGGCGGCAG CGTGTACTAC CGGCAGGTCG AGGCCGAGCA CGTGACCGAG
CAGTACCGCA ACCGGCTGCG CGAGGTCGAG GAGCAACTGG GCACCGATCA CCGCGAGGCG
TTGTCCGCGC TCGAATCGGT CGGCAAGCGC ATTCGCGCGC AGCAGCAGTC GCTGCAGGCC
GCGCGGCTCG CCTACGATGC GTCGATGAAA GCGCATCAGG TCGGCTACAG CACGACGTAC
GAAACGCTGA ACCTGCGGCG CGACATCTCG GGCATCCGGC AGAAGCTGTT CGACAGCTAT
CTCGATGCGC TGAAGCTTCA GTTGAAGCTG AAAAGCGTGC TCGGCACGCT CGACGAACAA
TCGCTGATCG CGGTGGACAG TTTCCTCGAA AGCAACGCGG CGAGCGATCG GGGGTGA
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| Protein sequence | MTLFAVTIAG APAHARAFCL DTAYQYASVH DPRYLQARSE YDAARQKFPE ARAQMLPQAA
AQLEWGRYGT HANLFGIDVS GSSNAAYGSA QVTQALFNVP YLYDMRRATE YEEAAKQKLE
VAKQDLILRV ANACFDLLSA REKLQSADDE VSALTRLESD TRRMAQLGMK TIGDTAEIEA
RRSLAQSDEA LAQTDVDARR ARYETLLGST IDFSRWPRLA MRGSSPRIPS GDYAPQDNPA
YRQAYRDVQV ARLAAKRVSA EHLPTVDLFA SYSRGLNPNL RGLTDRSDFH QSAVGVQVTI
PIFSGGSVYY RQVEAEHVTE QYRNRLREVE EQLGTDHREA LSALESVGKR IRAQQQSLQA
ARLAYDASMK AHQVGYSTTY ETLNLRRDIS GIRQKLFDSY LDALKLQLKL KSVLGTLDEQ
SLIAVDSFLE SNAASDRG
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