Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3284 |
Symbol | |
ID | 6126263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 112661 |
End bp | 114124 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641650395 |
Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
Protein accession | YP_001776930 |
Protein GI | 170735670 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0847385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0581994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCA AGCACTGGAT CGGCGGCCGC GAAGCGGAGA GCCGCGAAAC CTTCACGACG CTGAACCCGG CGACGGGCGA CGTCATCACC GACGTCGCGT CGGGCGGCGA GGCCGAGGTC GACGCGGCCG TGCGCGCGGC GAAGGAAGCG TTCCCCAAAT GGGCGAACAC GCCGGCGAAG GAGCGCGCGA AGCTGATGCG CAAGCTCGGC GAGCTGATCG AGAAGAACGT GCCGATGCTC GCCGCGCTGG AAACGCAGGA TACCGGCCTG CCGATCGCGC AGACGAGCAA GCAGCTGATT CCGCGCGCGT CCGAGAACTT CAACTTCTTC GCGGAAGTGT GCGTGCAGAT GAACGGCCGC ACCTATCCGG TCGACGACCA GATGCTGAAC TACACGCTGT ACCAGCCGGT CGGCGTGTGC GCGCTGGTGT CGCCGTGGAA CGTGCCGTTC ATGACCGCCA CGTGGAAGAC GGCGCCGTGC CTCGCGCTCG GCAACACGGC CGTGCTGAAG ATGTCGGAGC TGTCGCCGCT GACGGCCGAC CAGCTCGGCC GGCTCGCGCT CGAAGCGGGT ATCCCGCCGG GCGTGCTGAA CGTCGTGCAG GGTTACGGCG CGACGGCCGG CGATGCGCTC GTGCGGCATC CGGACGTGCG CGCGGTGTCG TTTACCGGCG GCACGGTCAC CGGCAAGCGG ATCATGGAGC GCGCGGGCCT CAAGAAGTAT TCGATGGAAC TCGGCGGCAA GTCGCCCGTG CTGATTTTCG ACGACGCCGA TTTCGACCGC GCGCTCGACG CGTCGCTGTT CACGATCTTC TCGATCAACG GCGAACGCTG CACCGCGGGC TCGCGGATCT TCGTGCAGCG CACGATCTAT GACCGCTTCG TGCAGGAATT CGCGCGCCGC GCGAACAACC TGGTGGTCGG CGATCCGACC GATCCGGGCA CGAATCTCGG CGCGATGATC ACGCGCCAGC ACTGGGAGAA GGTGACGGGC TATATCCGCA TCGGCGAGCA GGAAGGCGCG CGCGTGGTCG CGGGCGGCGC GGACAAGCCG GCCGGGCTGC CCGAGCATCT GCGCAACGGC AATTTCGTGC GGCCGACCGT GTTCGCCGAC GTCGACAACC GGATGCGCAT CGCGCAGGAA GAAATCTTCG GGCCGGTCGC GTGCATCATC CCGTTCGACG ACGAAGACGA CGGGCTGCGG CTCGCGAACG ACACGGCGTA CGGCCTTGCG TCGTACATCT GGACGCAGGA CGTGGGCAAG GTGCATCGGC TCGCGCGCGG CATCGAGGCC GGGATGGTGT TCGTGAACAG CCAGAACGTG CGCGACCTGC GCCAGCCGTT CGGCGGCGTG AAGGAATCGG GCACCGGGCG CGAGGGCGGC GAGTACAGTT TCGAGGTGTT CGCGGAGATC AAGAACGTGT GCATCTCGAT GGGTTCGCAT CACGTTCCGC GCTGGGGCGT GTGA
|
Protein sequence | MTIKHWIGGR EAESRETFTT LNPATGDVIT DVASGGEAEV DAAVRAAKEA FPKWANTPAK ERAKLMRKLG ELIEKNVPML AALETQDTGL PIAQTSKQLI PRASENFNFF AEVCVQMNGR TYPVDDQMLN YTLYQPVGVC ALVSPWNVPF MTATWKTAPC LALGNTAVLK MSELSPLTAD QLGRLALEAG IPPGVLNVVQ GYGATAGDAL VRHPDVRAVS FTGGTVTGKR IMERAGLKKY SMELGGKSPV LIFDDADFDR ALDASLFTIF SINGERCTAG SRIFVQRTIY DRFVQEFARR ANNLVVGDPT DPGTNLGAMI TRQHWEKVTG YIRIGEQEGA RVVAGGADKP AGLPEHLRNG NFVRPTVFAD VDNRMRIAQE EIFGPVACII PFDDEDDGLR LANDTAYGLA SYIWTQDVGK VHRLARGIEA GMVFVNSQNV RDLRQPFGGV KESGTGREGG EYSFEVFAEI KNVCISMGSH HVPRWGV
|
| |