Gene Bcenmc03_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3275 
Symbol 
ID6126254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp105022 
End bp106089 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content69% 
IMG OID641650386 
ProductABC transporter related 
Protein accessionYP_001776921 
Protein GI170735661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0100631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.197934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC TCATCGTCGA CGATCTGCAC CTCAGCTACG GCGCCAACCC GATCCTCAAG 
GGCGTGTCGT TCGAACTGAA GGCCGGCGAA GTCGTGTGCC TGCTCGGCGC GTCGGGCAGC
GGCAAGACCA CGCTGCTGCG TGCGGTGGCC GGCCTCGAAC AGCCGTCCAA CGGGGGCATC
CAGCTCGACG ACCGCGTGTT CTTCGACGGC GCTCGGCGCG TCGACCTGCC GGTCGAACAG
CGCTCGCTCG GCCTCGTGTT CCAGTCGTAC GCGCTGTGGC CGCACCGCAC CGTCGCCGAC
AACGTCGGCT ATGGCCTCAA GCTGCGCCGT GTCGCACCGG CCGAACAGAA GCGCCGCGTG
CAGACCGCGC TCGACCAGCT CGGCCTCGGC CATCTCGCCG AACGCTTTCC GCATCAGCTG
TCGGGCGGCC AGCAGCAGCG CGTCGCGATT GCCCGCGCGC TCGTCTACAA CCCGCCGGTG
ATCCTGCTCG ACGAGCCGCT GTCGAACCTC GACGCGAAGC TGCGCGAGGA AGCGCGTGCG
TGGCTGCGCG AGCTGATCGT GTCGCTCGGG CTGTCGGCCC TGTGCGTGAC GCACGACCAG
ACCGAAGCGA TGGCGATGTC CGATCGCATC CTGCTGCTGC GCAACGGCCG CATCGAGCAG
GAAGGCACAC CGGCCGAGCT GTACGGCGCG CCGCGCTCGC TGTACACCGC CGAATTCATG
GGCAGCAACA ACCGGATCGA CGCGCGCGTC GCCGCGATCG ACGGCGAATG CGTGACGCTC
GCCGGCGACG GCTGGCAACT GCAGGCGCTT GCCCGCGACA CGCTGGCACC CGGCCAGGAC
GCCCAGGCCG TGATTCGCCT CGAACGCGTG CAGGTCACTG ACGGCCCGGG CGCGAACCGC
CTGCAGGCCG ACCTCGTCAC GTCGATGTAT CTCGGCGATC GCTGGGAGTA CCTGTTCCAT
TGCGGCGAAA TGCGCCTGCG TGCGTTCGGC CATGTACCGC GCGCGGCCGG CAAGCACTGG
ATCGAATTCC CGACCAACGA CTGCTGGGCG TTCGCGAAAG CGGGCTGA
 
Protein sequence
MDKLIVDDLH LSYGANPILK GVSFELKAGE VVCLLGASGS GKTTLLRAVA GLEQPSNGGI 
QLDDRVFFDG ARRVDLPVEQ RSLGLVFQSY ALWPHRTVAD NVGYGLKLRR VAPAEQKRRV
QTALDQLGLG HLAERFPHQL SGGQQQRVAI ARALVYNPPV ILLDEPLSNL DAKLREEARA
WLRELIVSLG LSALCVTHDQ TEAMAMSDRI LLLRNGRIEQ EGTPAELYGA PRSLYTAEFM
GSNNRIDARV AAIDGECVTL AGDGWQLQAL ARDTLAPGQD AQAVIRLERV QVTDGPGANR
LQADLVTSMY LGDRWEYLFH CGEMRLRAFG HVPRAAGKHW IEFPTNDCWA FAKAG