| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3254 |
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| Symbol | |
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| ID | 6126233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 79276 |
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| End bp | 80496 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641650365 |
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| Product | porin |
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| Protein accession | YP_001776900 |
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| Protein GI | 170735640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.238701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC GCGTCGCTTT CGCCATGACG GCAGTCGGTC TCGCAGCCGC TACCGCCGCC
CACGCCCAGA GCAGCGTGAC CCTGTACGGT ATCGTCGACA ACGGTATCGC TTGGCAGAAC
AACTCGTCGG CAGTCGGCGC AACCTCGGGT GGTCACTCGA AGGTGCAGAT GTCCACCGGC
GTGTGGGCAG GCAGCCGCTT CGGCCTGAAG GGCAGCGAAG ATCTCGGCGG CGGCACGAAG
GCGATTTTCC AGTTGGAAGC CGGCGTCAAC ACGGCTAACG GCTCGTCGCA GTGGACCAAC
GGCATCTTCA CGCGTCAGGC ATGGGTTGGC CTGACCAACG CCACGTACGG TACGCTGACG
GCCGGCCGCC AGTACACCGC GTACTACACG CTGCTGTCGC CGTACAGCCC GACGACCTGG
CTGACCGGTT ACTACGGCGC GCACCCGGGC GATATCGATT CGCTGGATAC CAGCTACCGC
GCGAACAACT CGCTCGTCTA CATGTCGCCG AAGTTCTACG GCTTCACGGT CGGCGGTTCG
TACTCGTTCG GCGGCGTCGC GGGCGCGACG AACCGCGGCT CGACGTGGAG CGCGGCGATC
CAGTACCTGA ACGGCCCGGC AGGCATCGCG GTCGGCTATC AGAAGGTCAA CAACTCGACG
CTCGGCGGCG GCGTGTGGGG CGCGAACTCG ACGGTCCAGA ACGGCCTGAC GGCAGCAGGC
GACGGCAACC AGCCGGCAGT CTCGTCGATC AACAACGGCT ACGCGACCGC GCAATCGCAG
CAGCGTATCG CCGTGACGGC GGGCTACCAG TTCACGCCGG CATGGGATAT TTCGGCGTCG
TACTCGAACG TCCAGTACAC GCCGGGCACG GGTTCGTTCT TCCGGAACAA GGCAATCTTC
AACACGGCTG GCGCCGTGCT GCACTGGAAG GCAGCTGCTC AGTGGGACTT CGCGGCAGGC
TACTCGTACA CGGCCGCAAC GCAGTCGAAC GGCATCACGA GCTCGGCCAA GTACCACCAG
GTCACGCTGT CGCAGTACTA CAGCCTGTCG AAGCGCACGG GCCTGTACGC GGTTGAGGCT
TACCAGCACG CAAGCGGCAA CACGCTGAAC GGCCGCGGCA ACGCAATCAT CTCGGCGACC
ACGTCGATCG GTGACGGCGT GGGCGCAGGT TCGAAGCAGA ACCAGATCGG CGTCGGCGTC
GGCATGATCC ACCGCTTCTA A
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| Protein sequence | MKKRVAFAMT AVGLAAATAA HAQSSVTLYG IVDNGIAWQN NSSAVGATSG GHSKVQMSTG
VWAGSRFGLK GSEDLGGGTK AIFQLEAGVN TANGSSQWTN GIFTRQAWVG LTNATYGTLT
AGRQYTAYYT LLSPYSPTTW LTGYYGAHPG DIDSLDTSYR ANNSLVYMSP KFYGFTVGGS
YSFGGVAGAT NRGSTWSAAI QYLNGPAGIA VGYQKVNNST LGGGVWGANS TVQNGLTAAG
DGNQPAVSSI NNGYATAQSQ QRIAVTAGYQ FTPAWDISAS YSNVQYTPGT GSFFRNKAIF
NTAGAVLHWK AAAQWDFAAG YSYTAATQSN GITSSAKYHQ VTLSQYYSLS KRTGLYAVEA
YQHASGNTLN GRGNAIISAT TSIGDGVGAG SKQNQIGVGV GMIHRF
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