Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3241 |
Symbol | |
ID | 6126220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 65160 |
End bp | 65954 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641650352 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001776887 |
Protein GI | 170735627 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.804002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG ATCTGAAAGG CAAGACCGCG GTCGTCACCG CTTCCACCGC CGGCATCGGG CTCGCGATCG CCGAAGGGCT CGCGCGCGCC GGCGCGCACG TCGTCGTCAA CGGCCGCAGC GACCCGTCGG TGCAATCCGC GCTCGAGAAA CTGCGCGACA CCGTGCCCGG CGCAAGCTTC GACGGCGTCG CCGCCGACCT GTCCGACGCG GCCGGCGTCG CGCGCGTCAC GCAGCACACG CCGAATGCCG ACATTCTCGT CAACAACGCG GGCATCTACG GCCTGAAGGC GTTCTTCGAC ATCGACGACG CCGAATGGGA ACATTATTTC CAGATCAACG TGATGTCCGG CGTGCGGCTC GCACGGCATT ACCTGAAAGG GATGATCGAA CGCAATGCAG GGCGCATCGT GTTCATTTCG TCGGAATCGG GCCTGAACAT CCCCGTCGAC ATGATTCATT ACGGGTTCAC GAAAACCGCG CAGTTGTCGA TCGCGCGCGG CCTCGCGAAG CTCGCGGCCG GCACCCGCGT GACCGTCAAT TCGGTGCTGC CGGGGCCGAC GATGTCGGAA GGCGTGCGCG AGATGCTGAA GGCGCAGGCC GACGAAACGG GCCGCAGCAT CGACGACATT GCAGTGGAAT TCGTACGCAG CGAGCGCGCG AGCTCGATCA TCCAGCGACC GGCGACGACG GAGGAAGTCG CGAACCTGGT CGTGTACGTG TGCTCGCCGC AGGCATCAGC CACGACTGGC GCGGCGTTGC GCGTCGACGG CGGTGTGGTC GACACGATAG CGTGA
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Protein sequence | MQIDLKGKTA VVTASTAGIG LAIAEGLARA GAHVVVNGRS DPSVQSALEK LRDTVPGASF DGVAADLSDA AGVARVTQHT PNADILVNNA GIYGLKAFFD IDDAEWEHYF QINVMSGVRL ARHYLKGMIE RNAGRIVFIS SESGLNIPVD MIHYGFTKTA QLSIARGLAK LAAGTRVTVN SVLPGPTMSE GVREMLKAQA DETGRSIDDI AVEFVRSERA SSIIQRPATT EEVANLVVYV CSPQASATTG AALRVDGGVV DTIA
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