| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3226 |
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| Symbol | |
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| ID | 6126205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 49043 |
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| End bp | 50554 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641650337 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001776872 |
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| Protein GI | 170735612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.303935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0862047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCC GCGTGCACCC GGCCGCGATC GGCGCCGTCG CGATCGTCGC GGCCGCGGTG
CTCGCCGGCT GCACGGTCGG CCCGGATTAC CGGCGCCCGC CCGTCGATAC GCCGGCCGCG
TGGCGGCTCG ACCCGGCCGA CGCATACTGG CAGCCGGCCG CGCCGACCCG CGCGCCGCTC
GATCCCGCCT GGTGGACGGC GTTCGGCGAC GCCCAGCTCG ACGCGCTGGA AGCCGACGCG
CTGCGCAACA ACCAGAACCT GAAGGCGATG GCCGCGCGCT ACGACCAGGC GAAGGCGACG
CTCGCGTCGG TGGCGTCCGC ACAGTATCCG GCCGTCGGGC TGAACGCGAG CGGCCAGCGC
TTCAAGATCT CCGCCGACCG GCCGCAGACC AACTACGCGA CGCAGAGCAT GTCGACCGTG
CAGAACGAGA TCCAGGTCGG CGCGGCGGTC AGCTACGAAC TCGACCTGTT CGGCCGCGTG
CGGCGCAACG TCGAAGCTGC GCAGGCCAGC ACCGAGCAGT CGCGTGACGA TTTCGCGAAC
GCGCGCCTCG TGCTGAGCGC CGACCTCGCG TCGAGCTATT TCACGCTGCG CGAGCTCGAC
ACCGAGATCG ACGTCGTCAA GCGCTCGATC GACCTGCAAC AGAAGGCGCT CGATTACGTG
AGCGCGCGCC ACGACCTCGG CGCGGTGTCG GGCCTCGACC TGTTGCAGCA GCGCGCGCAG
CTCGACGCGA CGCGCACGCA GGCGCAATTG CTGATCCAGC AACGCGCGCA GGTCGAAACC
GCGATCGCGA CGCTGGTCGG CACGCCGGCC CCCGCGTTCT CGCTGCCGCC GCGCGTGGTG
CCGATCAACG CGCCCGCGCT GCCGACCGGC ATGCCGAGCG ACCTGCTGCA GCGGCGCCCC
GACGTCGCGT CGGCCGAGCG CGCGATGGCC GCCGCGAACG CGCAGATCGG CGTCGCGCGC
GCCGCGTATT TCCCGCGTAT CACGCTCTCG CCGGACATCG GCTGGGACGC GACGCGCTTC
GCGGGCCTGT TCACCGTGCC GGCGCTGCTG TGGTCGGTCG GCGGCTCGCT CAGCCAGCCG
CTGTTCGAGG GCGGCAAGCT GAAGGCCGGC GTCGATTTCG CGCAGGCCGG CTACGTCGCC
GCGCAGGCCA GCTACCGGCA AACCGTGCTC ACCGCATTCC AGGAGGTGCA AAATGCGGTG
ACCGGCCTGT CGGTGCTCGC GCAGGCCGCG CAGCAGGCTT CCGCGGCCGT CGACGACGCG
CGCAAGCTCG TGTCGCTCGC GCAGGATCGC TACGCGGGCG GCCTGACGCC GTTCATCGAC
GTGCTGACGG CCCAGCAACA GTTGCTGACG AGCGAGCGCC AGGCCGTGCA GATCCAGGGC
CAGCGCGCGG CGCTCGTCGT GTTTCTCGCG AAGGCGCTGG GCGGCGGCTG GGACGGCGAT
GCGGCGAGCG GCCCGGCACC GTCCGACGTC GCGTCGGCGG CCCCGCGGCG CGACGCGGGT
GTCGGCCCTT GA
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| Protein sequence | MRPRVHPAAI GAVAIVAAAV LAGCTVGPDY RRPPVDTPAA WRLDPADAYW QPAAPTRAPL
DPAWWTAFGD AQLDALEADA LRNNQNLKAM AARYDQAKAT LASVASAQYP AVGLNASGQR
FKISADRPQT NYATQSMSTV QNEIQVGAAV SYELDLFGRV RRNVEAAQAS TEQSRDDFAN
ARLVLSADLA SSYFTLRELD TEIDVVKRSI DLQQKALDYV SARHDLGAVS GLDLLQQRAQ
LDATRTQAQL LIQQRAQVET AIATLVGTPA PAFSLPPRVV PINAPALPTG MPSDLLQRRP
DVASAERAMA AANAQIGVAR AAYFPRITLS PDIGWDATRF AGLFTVPALL WSVGGSLSQP
LFEGGKLKAG VDFAQAGYVA AQASYRQTVL TAFQEVQNAV TGLSVLAQAA QQASAAVDDA
RKLVSLAQDR YAGGLTPFID VLTAQQQLLT SERQAVQIQG QRAALVVFLA KALGGGWDGD
AASGPAPSDV ASAAPRRDAG VGP
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