| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3225 |
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| Symbol | |
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| ID | 6126204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 47859 |
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| End bp | 49037 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641650336 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001776871 |
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| Protein GI | 170735611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.376119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.122741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGC CGGCGCGCGC GTCGGTGTCG CGACGCGGAC GGATCGTCCT GGTCGTGATC
GGCGTGCTGC TCGCGGCGGG CGCCGCGCGC ACCATCGTCG TCAACGTGCT GAACCAGCAT
CGCCTCGACG CGGTCGCCGC GCAGAACACG CGCCAGTACG TGAGCGTCGT GCATCCGGTC
GACGCGGCCA CCGGCGGCAA GCTGACGCTG CCCGGCACGC TGCGCGGCTT CGTCGAGGCG
CCGATCTATG CGCGCGCCAG CGGCTACGTG CTGCGCTGGC AGGCCGATAT CGGCGCGCAC
GTGAAGCAGG GGCAAACGCT CGCCGAACTC GACACGCCCG AGCTGAACCA GGAACTGGCA
CAGGCCACCG CGCAGCGCCA GCAGGCGCAA GCCGCGCTCG CGCTCGCGAA GACGTCGTTC
GACCGCGCGC AGCAGTTGCG CCAGCGCGAT GCCGTGTCGC AGCAGGAACT CGACGACCGG
CAAGGCGCGT TCAGCCAGGG CAGCGCGAAC CTCGCGGCGG CCGATGCGAA CATGCGCCGC
CTCACCGAGC TGAAGGGCTT CCAGCGGATC GTCGCGCCGA TCGACGGGAT CGTCACGCAG
CGCAACGTCG ACGTCGGCGA TCTCGTCAAT TCCGGCAACG CGGGCCGCTC GCTGTTCACG
GTCGTGCAGG CCGACCGGCT GCGCCTGTAC GTGCAGGTGC CGCAGGCGTA TGCGCAGCAG
GTGAAGGTCG GCCAGCACGT GAGCGTCGCG CAGGCCGAGC TGCCGGGTCG GACCTTCGAC
GGGACGATCA CGCGCACGTC GCAGGCGATC GACGTCGCGA CGCGTTCGCT GCAGATCGAG
ATCACGCTGC CGAACCCGGA CGGGCGGCTG CTGCCCGGCG CGTACGTGCA GGCGACGCTG
CCGATGACGC CGGTCGGCCG CCTGCAGGTG CCGGCCAATA CGCTGCTGTT CCGCGCCGAA
GGCCCGACGG TCGCCGCCGT CGATGCGAAC GGCCAGGTCC GGCTGAAACA GGTGACGGTC
GTGCGCACGA TCGGCCAGAC GCTCGAAGTC GACGGGCCGA TCACGCCGAA CGACCGCCTC
GTCGCGAACC CGAGCGACGC GCTCGCGACC GGCGACCGGG TCGTCGTGCA GGCGCCGGCT
GCGCAGCCCG CCTCGGCCGT CGCGGGGGCG AAGTCGTGA
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| Protein sequence | MHLPARASVS RRGRIVLVVI GVLLAAGAAR TIVVNVLNQH RLDAVAAQNT RQYVSVVHPV
DAATGGKLTL PGTLRGFVEA PIYARASGYV LRWQADIGAH VKQGQTLAEL DTPELNQELA
QATAQRQQAQ AALALAKTSF DRAQQLRQRD AVSQQELDDR QGAFSQGSAN LAAADANMRR
LTELKGFQRI VAPIDGIVTQ RNVDVGDLVN SGNAGRSLFT VVQADRLRLY VQVPQAYAQQ
VKVGQHVSVA QAELPGRTFD GTITRTSQAI DVATRSLQIE ITLPNPDGRL LPGAYVQATL
PMTPVGRLQV PANTLLFRAE GPTVAAVDAN GQVRLKQVTV VRTIGQTLEV DGPITPNDRL
VANPSDALAT GDRVVVQAPA AQPASAVAGA KS
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