Gene Bcenmc03_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3218 
Symbol 
ID6126197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp37246 
End bp37899 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID641650329 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001776864 
Protein GI170735604 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA AGCTTTATCT GTCGTTCCTC GCTGCTTCCG TCGTCCTCAT CTACGCGCCC 
GGCCCCGTCA ACCTGCTCAC GATGAACCAG GCGTTGCGCA CCGGCTGGCG CCGCGCGCTG
CCGTGCGTCT GGGGCGGCAC GCTCGCCGTG CTGCTGCAAC TCGCGCTGAC CGCGCTGTGC
CTCAACTCGC TGGTCCACCT CGACGAACAC GCACTGACGG TGCTGCGCTG GGCCGGCGCC
GCGTATCTCG TCTGGCTCGG CGGCAAGCAA TGGCTGAGCC GCACGCCGGC CGGCGCGGCC
GCGGCGCCGG CCGAGACCGA CGCAGGAACG GCCATCGCCA CGCCGGACAC CGACGGACGC
GCGCTGTTCT GGCGCGGCGT CGCGACTTCC GGGCTGAATC CGAAGACGCT GCTGTTCTTT
CCGTCGTTCT TTCCGCAGTT CATCAGCCCG AATGCCGACT GGAGCCTGAA CCTTCAATAC
CTGCTGCTCG CCGCGACGTT CGCGCTGCTG TTCGCGGGCG GCGTCGCATC GATGGCGCTG
TTCTCGCACC GGCTGAGCCG CGCGTTGCAG CGGCCGGCGC GGATGCGTGC GATGAACCGC
GTGACGGGCG GGCTGCTCGT CGGGATGGGT GCGATCATGG TCGGCTGGAA CTGA
 
Protein sequence
MSFKLYLSFL AASVVLIYAP GPVNLLTMNQ ALRTGWRRAL PCVWGGTLAV LLQLALTALC 
LNSLVHLDEH ALTVLRWAGA AYLVWLGGKQ WLSRTPAGAA AAPAETDAGT AIATPDTDGR
ALFWRGVATS GLNPKTLLFF PSFFPQFISP NADWSLNLQY LLLAATFALL FAGGVASMAL
FSHRLSRALQ RPARMRAMNR VTGGLLVGMG AIMVGWN