Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3206 |
Symbol | |
ID | 6126185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 23919 |
End bp | 25160 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641650317 |
Product | major facilitator transporter |
Protein accession | YP_001776852 |
Protein GI | 170735592 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.130501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.812744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGC CGGCAGCGGG CGTGTTCCGC TCGCTTCGCA GCTTCAACTA CCGCGTATGG GCGATCGGCT CGCTGGTGTC GAACATCGGC ACGTGGATCC AGCGCACCGC GCAGGACTGG CTCGTCCTCA CGCAGCTCAC GCATCACGAC GCATCGGCCG TCGGCACGGT GATGGCGCTG CAGTTCGGGC CGCAACTGCT GCTGTTGCCG TGGACCGGCT ACGCGGCCGA CCGCTTCGAC CAGCGCAAGC TGCTGATGGC GACGCAGGCG CTGATGGGCG CGCTGGCGCT CGTGCTCGGC GTGCTGACGG TCACCGGCGC CGTGCGGCTC GAGCACGTGT ATGTATTCGC GTTCCTGTTC GGCTGCGCGT CGGCGTTCGA CGCGCCGGTG CGGCAGACGT TCGTCGCGGA ACTGGTCGGC GACCGCGAAC TCGCGAACGC GGTCGCGCTC AACTCGACGT CGTTCAATGC CGCGCGGATG GTCGGCCCGG CGGCGGCCGG CTTCCTGATC GCATCGGTCG GCACCGGCTG GGCGTTTCTC GCGAACGGGC TCAGCTTCTT CGCGGTGCTG GCGTCGCTGT CGCGGCTTCG GGAGGACGAA CTGCGCACCA ATGTGCGGGC AGGCCGCTCG CGCGGCAGCC TGCTCGACGG GTTCCGCTAC GTGTGGCGCC GGCCGGACCT CACAGCCATC CTCGTGATGC TGTTCCTGAT CGGCACGTTC GGGCTGAATT TCCAGTTGTT CATTTCGACG ATGGCCGCCA GCGTGTTTCA CGTCGATGCG CGCGGGTTCG GTTTCCTGTC GTCGATGATG GCGGTCGGCA CGATCTCGGG CGCGCTGCTC GCCGCGCGCC GCGAGCAGCC GCGCTTCCGT CATCTGTGGA TCGGCGCGGC GCTGTTCGGG CTCGGCTGCG CGTTCGCCGC GCTGGCGCCC GGCTACTGGT CGTTCGCGGC CGCGCTGGTT CTGACCGGCG TCGCCGCGAT CACCTTCATG AACTCGACCA ACAGCCTGAT GCAGCTTTCC ACCGAGCCGG CGATGCGCGG CCGCGTAATG GCGCTGCGTC TCGCGGTCGC ATTGGGCGGC ACGCCGATCG GCGCGCCGGT GGCCGGCTGG GTCGCGAACC ATCTCGGCCC GCGCTGGGCG CTCGGCCTCG GCGCGGCGTC CGGCTTTGCC GCGGCGCTCG TCGCGACCCA TTTCGCCACG CGCAAGCGGG CGCAGCCCCG CGCGTCCGAC GACGGGGCCT GA
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Protein sequence | MSVPAAGVFR SLRSFNYRVW AIGSLVSNIG TWIQRTAQDW LVLTQLTHHD ASAVGTVMAL QFGPQLLLLP WTGYAADRFD QRKLLMATQA LMGALALVLG VLTVTGAVRL EHVYVFAFLF GCASAFDAPV RQTFVAELVG DRELANAVAL NSTSFNAARM VGPAAAGFLI ASVGTGWAFL ANGLSFFAVL ASLSRLREDE LRTNVRAGRS RGSLLDGFRY VWRRPDLTAI LVMLFLIGTF GLNFQLFIST MAASVFHVDA RGFGFLSSMM AVGTISGALL AARREQPRFR HLWIGAALFG LGCAFAALAP GYWSFAAALV LTGVAAITFM NSTNSLMQLS TEPAMRGRVM ALRLAVALGG TPIGAPVAGW VANHLGPRWA LGLGAASGFA AALVATHFAT RKRAQPRASD DGA
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