Gene Bcenmc03_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3206 
Symbol 
ID6126185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp23919 
End bp25160 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID641650317 
Productmajor facilitator transporter 
Protein accessionYP_001776852 
Protein GI170735592 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.130501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.812744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC CGGCAGCGGG CGTGTTCCGC TCGCTTCGCA GCTTCAACTA CCGCGTATGG 
GCGATCGGCT CGCTGGTGTC GAACATCGGC ACGTGGATCC AGCGCACCGC GCAGGACTGG
CTCGTCCTCA CGCAGCTCAC GCATCACGAC GCATCGGCCG TCGGCACGGT GATGGCGCTG
CAGTTCGGGC CGCAACTGCT GCTGTTGCCG TGGACCGGCT ACGCGGCCGA CCGCTTCGAC
CAGCGCAAGC TGCTGATGGC GACGCAGGCG CTGATGGGCG CGCTGGCGCT CGTGCTCGGC
GTGCTGACGG TCACCGGCGC CGTGCGGCTC GAGCACGTGT ATGTATTCGC GTTCCTGTTC
GGCTGCGCGT CGGCGTTCGA CGCGCCGGTG CGGCAGACGT TCGTCGCGGA ACTGGTCGGC
GACCGCGAAC TCGCGAACGC GGTCGCGCTC AACTCGACGT CGTTCAATGC CGCGCGGATG
GTCGGCCCGG CGGCGGCCGG CTTCCTGATC GCATCGGTCG GCACCGGCTG GGCGTTTCTC
GCGAACGGGC TCAGCTTCTT CGCGGTGCTG GCGTCGCTGT CGCGGCTTCG GGAGGACGAA
CTGCGCACCA ATGTGCGGGC AGGCCGCTCG CGCGGCAGCC TGCTCGACGG GTTCCGCTAC
GTGTGGCGCC GGCCGGACCT CACAGCCATC CTCGTGATGC TGTTCCTGAT CGGCACGTTC
GGGCTGAATT TCCAGTTGTT CATTTCGACG ATGGCCGCCA GCGTGTTTCA CGTCGATGCG
CGCGGGTTCG GTTTCCTGTC GTCGATGATG GCGGTCGGCA CGATCTCGGG CGCGCTGCTC
GCCGCGCGCC GCGAGCAGCC GCGCTTCCGT CATCTGTGGA TCGGCGCGGC GCTGTTCGGG
CTCGGCTGCG CGTTCGCCGC GCTGGCGCCC GGCTACTGGT CGTTCGCGGC CGCGCTGGTT
CTGACCGGCG TCGCCGCGAT CACCTTCATG AACTCGACCA ACAGCCTGAT GCAGCTTTCC
ACCGAGCCGG CGATGCGCGG CCGCGTAATG GCGCTGCGTC TCGCGGTCGC ATTGGGCGGC
ACGCCGATCG GCGCGCCGGT GGCCGGCTGG GTCGCGAACC ATCTCGGCCC GCGCTGGGCG
CTCGGCCTCG GCGCGGCGTC CGGCTTTGCC GCGGCGCTCG TCGCGACCCA TTTCGCCACG
CGCAAGCGGG CGCAGCCCCG CGCGTCCGAC GACGGGGCCT GA
 
Protein sequence
MSVPAAGVFR SLRSFNYRVW AIGSLVSNIG TWIQRTAQDW LVLTQLTHHD ASAVGTVMAL 
QFGPQLLLLP WTGYAADRFD QRKLLMATQA LMGALALVLG VLTVTGAVRL EHVYVFAFLF
GCASAFDAPV RQTFVAELVG DRELANAVAL NSTSFNAARM VGPAAAGFLI ASVGTGWAFL
ANGLSFFAVL ASLSRLREDE LRTNVRAGRS RGSLLDGFRY VWRRPDLTAI LVMLFLIGTF
GLNFQLFIST MAASVFHVDA RGFGFLSSMM AVGTISGALL AARREQPRFR HLWIGAALFG
LGCAFAALAP GYWSFAAALV LTGVAAITFM NSTNSLMQLS TEPAMRGRVM ALRLAVALGG
TPIGAPVAGW VANHLGPRWA LGLGAASGFA AALVATHFAT RKRAQPRASD DGA