Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3194 |
Symbol | |
ID | 6126173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 9997 |
End bp | 11139 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641650305 |
Product | porin |
Protein accession | YP_001776840 |
Protein GI | 170735580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.809666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CCTTGATCGC CGGCGCGAGC GCCGCCGCAC TCTTCACGCC GCTCGCCCAC GCGCAAAGTT CGGCCACGCT GTATGGCCTG ATCGACGCCG GCATTGCCTA TACCAACAAC GCGAACGGCG CGGCGCAGTG GCGCATGACG ACCGGCACGA TCAATGGCAG CCGCTTCGGC CTGCGCGGCA GCGAGGATCT CGGCGGCGGG CTGAAAGCGC TGTTCGTGCT CGAAAACGGC TTCAACGCGA ACAACGGCGG GCTGGGCCAG GACGGCAAGC TGTTCGGCCG GCACGCGTAC GTCGGCCTGA GCCAGGCCGG CTACGGCACG CTGACGCTCG GCCGCCAGTA CGACACGATG GTCGATTTCG TCGCGCCGTT GTCGGCGACG TCCGGCGATT TCGGCGATAC GGGCTTCGCG CATCCGTTCG ACAACGACAA CCTGAACCAT TCGGTGCGCA TCAACAACGC GGTCAAGTAC ACGAGCGACA CGGTCGCGGG CTTCAAGATC GGCGCGCTGT ACGCGTTTTC CAACTCGGCG AATTTCAGCG CGAACCGCGC ATACAGCGTG GCCGCGAGCT ACACGAACGG CCCGCTGAAG CTGGCCGGTG CGTACCTGCA GATGAACGGC ACCAAGGGTT CGACGAGCGC AAGCCCCGGC GCGACCGATT CGGCCGAAGC GAAAAGCCTG AACCAGGGCG GCTGGTCGAT CGGCTCGGAC CGCATGCGCA CGTACGGCGG CGGCGTCAGC TACGTGTTCG GCCCGGCGAC CGTCGGCTTC GTCTACACGC GCTCGCAGTA CGACAACACG GGCGCGTTCG GCTCAAGCGG CCAGATCGCG TTCGACAACT ACGACGTGAA CGTGCGCTAT GCGGTCACGC CGGCCGTCAG CGTCGGCGCG GCCTATGTCT ATACGGACGC CAGCGTGTCG AATCCCGACA GCAAGCACGG CACCGATCCG AAATGGCATC AGGCCAACCT GCAGGCCGTG TACAAGCTGT CGCGCCGCAC CGACCTGTAC GCGGAAGCGA TGTTCCAGCA CGCGTCGGGC CGCGGCTACC AGGCGTTCAT CAACACGTCG GGCGGCGCAT CGAGCACCGC GAATCAGGTG GTCGGCACGA TCGGCATGCG CACGCGGTTC TGA
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Protein sequence | MKKTLIAGAS AAALFTPLAH AQSSATLYGL IDAGIAYTNN ANGAAQWRMT TGTINGSRFG LRGSEDLGGG LKALFVLENG FNANNGGLGQ DGKLFGRHAY VGLSQAGYGT LTLGRQYDTM VDFVAPLSAT SGDFGDTGFA HPFDNDNLNH SVRINNAVKY TSDTVAGFKI GALYAFSNSA NFSANRAYSV AASYTNGPLK LAGAYLQMNG TKGSTSASPG ATDSAEAKSL NQGGWSIGSD RMRTYGGGVS YVFGPATVGF VYTRSQYDNT GAFGSSGQIA FDNYDVNVRY AVTPAVSVGA AYVYTDASVS NPDSKHGTDP KWHQANLQAV YKLSRRTDLY AEAMFQHASG RGYQAFINTS GGASSTANQV VGTIGMRTRF
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