| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3192 |
|---|
| Symbol | |
|---|
| ID | 6126171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 6921 |
|---|
| End bp | 8186 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641650303 |
|---|
| Product | chloride channel core |
|---|
| Protein accession | YP_001776838 |
|---|
| Protein GI | 170735578 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG TCACGGTCCT GACCGGTATC GGCGCGGGGC TCGGCGGCAT GCTGCTCGCG
TTGCTGCTGC ATGCGATCCA GCACCTCGCG TACGGCTACA GCATCGCGCA CGTGATCGGG
TCCGAGAGCT TCCTCACTGG CGTGACCGCG GCTGAGCCGC TGCGCCGGCT CGCGGTGCTG
GTCGGCTGCG GGATCGTCGC CGGCGGCGGC TGGTGGGCGC TTTACCGGTA TGGCCGCCCG
CTCGTCAGCA TCCGTCGCGC GGTGCGCGCG GCCGATCCGC GGATGCCGTT CGTCAGCACG
ACGGTTCACG CGCTGCTGCA GATCGTCACC GTCGCGCTCG GCTCGCCGCT CGGCCGCGAA
GTCGCGCCGC GCGAGATCGG CTCGCTGCTC GCCGGGCGGT TCGCGCATGC GGCGCGACTC
ACGCCCGACG ATTGCCGGCT GATGGTTGCG TGCGGCGCCG GTGCGGGGCT CGCGGCCGTC
TACAACGTGC CGCTCGGCGG CGCGATCTTC GTGCTCGAGG TGCTGCTCGG CACGTTCGAA
ATACGTGCGC TGATCGTGGC GGTCGTGACG TCCGCGATCG CGGCGATCGT CGCGTGGGTC
GGTCTCGGCA ACGAGCACCA GTACACGGTA CCGGCGTTCG TGCTGAGCAC CCCGCTCGTC
GCATGGTCGA TCGTCTGCGG GCCGCTGTTC GGCTTCGCCG CGTACGGTTT CGTGCGGCTC
ACGACCCGCG CGCGGGCGAA CGCGCCGAAG GACTGGCGGC TGCCGGTGTT CGCGCTGCTC
AATTTCGCGG TGATCGGCGT GCTCTCGATG GGGTTTCCGC AACTGCTCGG CAACGGCAAG
GGTCCGGCGT CGCTGGGCTT CGACGGCACG CTGACGATCG GCCTCGCGGC GGTGCTGCTC
GTGCTGAAGG TGATGATCGA GGCCGGCAGC CTGCGGGCCG GCGCGGAAGG CGGGCTGCTG
ACGCCGGGCC TCGCGAACGG CGCGCTGCTC GGGGTCGTGC TCGGTGGACT GTGGAGCATC
GTGTGGCCGG GCGCATCGCT CGGCGGATGC GCGCTGATCG GCGCGACCGC GTTTCTCGCC
GCGTCGATGC AGATGCCGAT CACCGCCGTC GTGCTGCTGC TCGAATTCAC GCGCGCGAAT
CACGACAGCC TCGTGCCGAT GCTGCTGGCG GTGGCGGGTT CGCTCGTTGC GTACCGGTTC
GCGCAGCGGG TGGCGGAGCG GCGGTCGAGC AAGGTCGCGA GCACGCCGGC GACGGTGGCC
CGTTGA
|
|---|
| Protein sequence | MAVVTVLTGI GAGLGGMLLA LLLHAIQHLA YGYSIAHVIG SESFLTGVTA AEPLRRLAVL
VGCGIVAGGG WWALYRYGRP LVSIRRAVRA ADPRMPFVST TVHALLQIVT VALGSPLGRE
VAPREIGSLL AGRFAHAARL TPDDCRLMVA CGAGAGLAAV YNVPLGGAIF VLEVLLGTFE
IRALIVAVVT SAIAAIVAWV GLGNEHQYTV PAFVLSTPLV AWSIVCGPLF GFAAYGFVRL
TTRARANAPK DWRLPVFALL NFAVIGVLSM GFPQLLGNGK GPASLGFDGT LTIGLAAVLL
VLKVMIEAGS LRAGAEGGLL TPGLANGALL GVVLGGLWSI VWPGASLGGC ALIGATAFLA
ASMQMPITAV VLLLEFTRAN HDSLVPMLLA VAGSLVAYRF AQRVAERRSS KVASTPATVA
R
|
|---|
| |