Gene Xfasm12_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2276 
Symbol 
ID6120040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp2418008 
End bp2418670 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID641650214 
Productamino acid transporter 
Protein accessionYP_001776754 
Protein GI170731321 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATACTAC AAACCTATTT CTTGAATTTT CATCATCACT TCTTGCAAGA GAACGCAGCC 
ATGCATGGCC CCTCTATTTA TTTCATACTG ACCGTGCTGA TGTTTAGCAT CAGTCCGGGG 
CCAGCCATGA TGTTTGTGCT TCAGCAATCC CAGAAGAACG GGGTTAAAAC TGGTCTGGCT 
GCAGTGCTTG GGACTGAGAT TGGCGTATTT ATTTACGTCA TCCTCACCGC ATTGGGTATC 
AGTACTGTTT TAAAGCAATA CCCATCCATT TATACCGGCC TGCAAGGGAT AGGTGCGGCC 
TATCTGCTTT ACATCGCCTA CCTCAGCTGG CCCCGTCAGA ATGCTTCAAA CCAGACTCCT 
ACAGCGTCCC GTTCAAGTTA CACAGGCACC TTCATGCAAG GAGTGCTGAT TAACCTGACG 
AATCCCAAGA TCGTTTTGTT CTTCCTGAGT CTTATCCCTC AATTCGTCCC ACGAGATAGC 
AATGCCATGA CCTTTATGGT GTACGGGTTG ATCTTCAACA CGAGCGGCCT CTTAGTGAAC 
TTCTCTGTCG CTCTTCTGGC AGACAGGGTC AATCGTATGC TTCGGAACGT CACATGGTTT 
AACTACGTGC CACCGATTCT CTTTATTAGC ATCGCTGTTC TCTCAATGAA AGCACGTCTC 
TAA
 
Protein sequence
MILQTYFLNF HHHFLQENAA MHGPSIYFIL TVLMFSISPG PAMMFVLQQS QKNGVKTGLA 
AVLGTEIGVF IYVILTALGI STVLKQYPSI YTGLQGIGAA YLLYIAYLSW PRQNASNQTP 
TASRSSYTGT FMQGVLINLT NPKIVLFFLS LIPQFVPRDS NAMTFMVYGL IFNTSGLLVN 
FSVALLADRV NRMLRNVTWF NYVPPILFIS IAVLSMKARL