Gene Xfasm12_2267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2267 
Symbol 
ID6120031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2403935 
End bp2407006 
Gene Length3072 bp 
Protein Length1023 aa 
Translation table11 
GC content60% 
IMG OID641650206 
Producttype I restriction-modification system endonuclease 
Protein accessionYP_001776746 
Protein GI170731313 
COG category[V] Defense mechanisms 
COG ID[COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGGA CTGACACCAG TGAGCGCTGG TTCGAGGCGC GCGTGGTGCG TGGCCTGACT 
GGCGTGCCGC AGCCCGAGTA CAGCCATGAG CTGGCGCCCA CGGACTTTGC CGCCACCCAC
AACGGCTATG TGCAGGGCAA GCCCACTGAC TACAACCGCG ACGTGGCGTT GGATGTGACG
CAGTTGCTGG CCTTCTTGCA GGCCACTCAG CCGAAGGTGG TGGAGACATT GGAGCTGGCG
GCGGACGGTA TCAAACGCAC TCAGTTTCTG CACCGCCTGC AAGGGGGGAT CACTAAGCGC
GGCGTGGTGG ACGTGCTGCG CAAGGGCGTA AGCCACGGGC CGGTACACGT GGATCTGTAC
AAGTTGCTGC CCACGCCGGG CAATGCCGCT GCGGCGGATG CCTTCGGCAA GAACATGTTC
AGTGTCACTC GGCAGGTGCG CTACAGCAAT GATTCCGGCA ATGAACTGGA CTTGGTGATC
TTCATCAACG GCCTGCCGGT GTTGACCTTT GAGTTGAAGA ATTCGCTGAC CAAGCAGACT
CTGGCCGACG CCATCGTCCA GTATCAGACC ACGCGTAGCC CGAAGGAGTT GCTGTTCCAG
TTGGGCCGTT GCGTGGCGCA CGTCGCGGTC GATGATGCGG AGGCCGCGTT CTGCACCGAG
CTGAAAGGCA AGGCGTCGTG GTTCCTGCCG TTCAATCAGG GCTGGAACAG CGGTGCGGGC
AATCCGCCCA ACCCGGATGG TCTGAAGACC GACTACCTGT GGAAGCAGGT GCTGACCTGC
GAGTCGCTGG CCAACCTCAT CGAGAGCTAC GCGCAGGTGG TGGAAGAGGA AGAAGCGGAT
GCCAGCGGCA AGAAGCGTAA GACGCGTAAG CAGATCTTCC CGCGCTTCCA TCAGTTGCGC
ACGGTACGTG CTCTGCTGCG CCGGACCCGT ACCGACGGAG TAGGCAAGCG TTATTTGATC
CAGCATTCGG CAGGCAGCGG CAAGAGCAAC ACGATTGCGT GGCTAGCGCA CCAGCTGGTG
GAGCTGCGCC GCAAGGACGA CCCACTGAGG GTGCAGTTCG ATTCCATCAT CGTCATCACC
GACTGGCGCA CGCTGGACAA GCAGATCGCC GACATCATCA AGGGGTACGA CCACGTGGCG
GCGATCTTCG GCCACTCCGA CAACGCGCAG GAGCTGCGCG AGTATCTGCG CCGGGGCAAG
AAGATCATTG TCACCACGGT GCAGAAGTTC CCGTTCATCC TTGATGAGCT GGGCGATCTC
TCTGGCAAGA GGTTCGCGCT GTTGATCGAT GAGGCGCATT CCAGCCAGGG CGGCAAGACC
ACGGCGCGGA TGCACGAAGC TCTCGGCGGC AAGGTGGCCG AGGAGGAGTT CGAGGAGGAC
AGTACGCAGG ATGCGGTCAA CGCGGAAATC GAGAGGCGCA TCGCCTCGCG CAAGCTGCTC
GCCAACGCCA GCTACTTCGC GTTCACGGCC ACACCCAAGA ACAAGACGCT GGAGTTGTTC
GGTGAGAGGA CTCTTGTTGG CGACAAGGTG CAGTTCCGCT CGCCTGAAGA GCTGACCTAT
ACCACGAAGC AGGCGATCCA GGAGAAGTTC ATCCTCGACG TGGTGGAGAA GTACACCCCC
TACGACAGTT TCTATCAAGT CGCCAAGACG GTGGCGGACG ATCCGGAATT CGACAAGGTG
AAGGCGCTGA AGAAGATCCG CCTCTACGTC GAGTCGCACG ACAAGGCGAT CCGCCGCAAG
GCCGAGATCA TGGTGGATCA CTTCATCGCA TGTGTCGCAG GCAAGCAGAT AATTGGTGGC
CAGGCGCGGG CGATGATTGT GTGCAACGGC ATCGCGCGGG CCATTGATTA CTGGCGTGAG
GTGTCGGACT ACCTCACGCA GATCAAAAGC CCGTACAAGG CCATCGTGGC GTACTCGGGC
AGCTTCGAGA TTGGCGGGCA GAAGAAGACG GAGGCTGATC TCAATGGGTT TCCGAGCAAG
AAGATTCCGG AGAATCTCAA GAAAGACCCG TATCGCTTTC TGATCGTTGC CAACAAGTTT
GTCACCGGCT TCGATGAGCC TTTGTTGCAC ACCATGTACG TGGATAAGCC GCTGGCGGGC
GTGCTGGCGG TTCAGACTCT GTCACGTCTG AACCGCGCGC ACCCGCAAAA GCGCGATACG
TTCGTGCTCG ACTTTGCCGA CAACGCCGAG GCGGTGAAGG CGGCGTTCCA GGACTACTAC
CGCGCCACCA TCCAGATGGG CGAAACCGAC CCCAACAAGC TGCATGATCT GAAGGCCGAA
CTCGATGGGC AGCAGGTGTA TAGCTGGCCG CAGGTGGAAG ATTTGGTGGC GCTGTACGTG
AGTGGCGCGG ATCGGGACAA GCTTGACCCC ATCTTGGATG TGTGCGTGGC CGAATACACC
GACAGGCTCG GCGAGGACGA TCAGGTCAAG TTCAAGGGCA AGGCCAAGGC GTTCGTGCGC
AGCTACGGCT TCTTTGCTGC GATCTTGAGT TACGGTCATC CTGGTTGGGA AAAGCTGTCG
ATTTTTCTGA ACTTTCTCAT CCCCAAGCTG CCTGCGCCCA AGGAGGAGGA CTTCTCCAAG
GGGGTGCTGG AGACCATCGA TATGGACAGC TACCGGGTGG AGGCCAAGGC GGCGCTGAAG
ATGGCGATGG ACGACGCAGA TGCCTCTGTC GAGCCAGTGC CTTCGGGAGG CGGTGGCGGC
AAGGGTGAGG CAGTCATCGA TAGACTCTCG GTGATCATCA AAACCTTCAA CGATCTGTTC
GGCAACATCC AGTGGAAGGA CGAGGACAAG ATCCGCAAGG TCATCGCCGA GGAAATTCCG
GCGCGGGTGG CGCAGGACAA GGCTTACCAG AATGCGCAGG TGAATTCCGA CAAGCAAAAC
GCCAAGCTGG AGCACGACAA GGCGCTCAAT CGCGTGGTGC TGGAGTTGTT GTCTGACCAC
ACTGAGCTGT TTAAGCAGTT CAGTGATAAC CCTAACTTCA AGCGCTGGCT GACGGACACG
GTGTTTGATG CGACTTATCA GACTGGGGCG GTTCCTCCGA AGGTACCGCC ACAGGTGGGG
GCGTCGGCAT GA
 
Protein sequence
MTRTDTSERW FEARVVRGLT GVPQPEYSHE LAPTDFAATH NGYVQGKPTD YNRDVALDVT 
QLLAFLQATQ PKVVETLELA ADGIKRTQFL HRLQGGITKR GVVDVLRKGV SHGPVHVDLY
KLLPTPGNAA AADAFGKNMF SVTRQVRYSN DSGNELDLVI FINGLPVLTF ELKNSLTKQT
LADAIVQYQT TRSPKELLFQ LGRCVAHVAV DDAEAAFCTE LKGKASWFLP FNQGWNSGAG
NPPNPDGLKT DYLWKQVLTC ESLANLIESY AQVVEEEEAD ASGKKRKTRK QIFPRFHQLR
TVRALLRRTR TDGVGKRYLI QHSAGSGKSN TIAWLAHQLV ELRRKDDPLR VQFDSIIVIT
DWRTLDKQIA DIIKGYDHVA AIFGHSDNAQ ELREYLRRGK KIIVTTVQKF PFILDELGDL
SGKRFALLID EAHSSQGGKT TARMHEALGG KVAEEEFEED STQDAVNAEI ERRIASRKLL
ANASYFAFTA TPKNKTLELF GERTLVGDKV QFRSPEELTY TTKQAIQEKF ILDVVEKYTP
YDSFYQVAKT VADDPEFDKV KALKKIRLYV ESHDKAIRRK AEIMVDHFIA CVAGKQIIGG
QARAMIVCNG IARAIDYWRE VSDYLTQIKS PYKAIVAYSG SFEIGGQKKT EADLNGFPSK
KIPENLKKDP YRFLIVANKF VTGFDEPLLH TMYVDKPLAG VLAVQTLSRL NRAHPQKRDT
FVLDFADNAE AVKAAFQDYY RATIQMGETD PNKLHDLKAE LDGQQVYSWP QVEDLVALYV
SGADRDKLDP ILDVCVAEYT DRLGEDDQVK FKGKAKAFVR SYGFFAAILS YGHPGWEKLS
IFLNFLIPKL PAPKEEDFSK GVLETIDMDS YRVEAKAALK MAMDDADASV EPVPSGGGGG
KGEAVIDRLS VIIKTFNDLF GNIQWKDEDK IRKVIAEEIP ARVAQDKAYQ NAQVNSDKQN
AKLEHDKALN RVVLELLSDH TELFKQFSDN PNFKRWLTDT VFDATYQTGA VPPKVPPQVG
ASA