| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2257 |
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| Symbol | gltD |
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| ID | 6120873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2388973 |
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| End bp | 2390514 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641650196 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001776736 |
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| Protein GI | 170731303 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000664143 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTTCCC GCTGGATGGT GAGTGCGTGG AACGAAGAAG TCACGGAATC TTTATTTATG
AGTCGCAAGC ACGCTTTCCA ATTTCTCGAT TTGCCTCGGC AGATGCCGCA ACGTATCCCG
GTGGAGCTGC GTACTTCCGG GGATTGGCGG GAGTTATACG GTAAGTTCGA TAAGGGCGAA
GCGCAGTACC AAGCCGGTCG CTGTTTGGAC TGTGGTAATC CATATTGCAG TTGGAAGTGT
CCGGTGCATA ACGCCATCCC GCAGTGGTTG CAGTTAGTGC AGGAAAATCG CATTGATGAG
GCCGCAGCGT TGTGCCATGC AACCAACCCG CTTCCTGAAG TGTGCGGCAG GGTGTGTCCG
CAGGACCGTC TCTGTGAAGG CAGTTGCACG CTGGAGGAGT TTGGTGCGGT CACTATCGGT
GCGGTGGAAA AGTACATTGT GGATACCGCG TTGCAGCAGG GGTGGCGTCC CGATTTGAGC
CATGTGCAAC CGACGGGTTG GCGTGTGGCG GTGGTCGGTG CAGGGCCTGC CGGCCTTGCC
TGTGCGGATC GGTTGGCGCG TGCTGGGGTC CAGGCGGTGG TGTATGACCG CTATGAGCAG
ATCGGGGGCT TGCTGCAGTT CGGGATTCCC AGTTTTAAGC TTGATAAGGC GGTGATGAGT
ACGCGCCGCC AAGTGCTTGA GGGCATGGGC GTAGAGTTTC GATTGGGTGT GGAGATTGGA
AAGGATCTGG GGATTGAAGC GTTGCTGGAG GACTACGATG CAGTGTTCCT TGGCGTCGGT
GCGTATCGCT ACACGGACGG TGGCTTGCCG GGTCAGGACT TGAAAAACGT GTTGCCGGCA
TTACCGTTTT TGGTTCAGAA CGGACGTATC GTTTCTGGCA ATGATCCGTA TGGCCGTCCG
ATTGCCGGTT GGGAGGATCA GGTGCAGTTG CCGGATGTGA CGGGGAAGTC TGTGGTTGTA
CTCGGTGGCG GTGATACCGG CATGGATTGT GTACGGAGTG CGATCCGTTT AGGTACCACC
AAAGTCACCT GTATCTATCG GCGCGATGAG GCGAATATGC CTGGCTCGGC GCGTGAGGTT
GCTAACGCGC GGGAAGAGGG GGTGCGCTTT CTGTTTAATC GTCAGCCATT GTCGATTCAA
TCCGGTACCG ACAAACAAGC CATTGGTGTC ACTGTGGTGG AAACGAAGCT TGCTGAGCCG
GATGCCAATG GTCGTCGCAA CGCAGTGCCT ATCCAGGGCA CTGAAGCGGT GCTGGAAGCG
GATGTGGTGA TTATCGCTTT TGGTTTTTCG CCGATGTTGC TGGAGTGGTT AACTGCGCAG
GGTGTACAAG CGTCGAGCAA CGGCCGCATT GTGGTGGCGT TGTCTGATAC TGGCGATAGA
CTGACCTATC AGACAACGCA TCCGAAGTTG TTTGCTGGTG GTGATTGTGT GCGTGGTGCC
GATTTGGTTG TCACTGCCGT GGCCGAAGGG CGCGACGCGG CTGAGAGCAT TGTGCGGTGG
TTGCGTGCGA CTGCACAGGT GATGGATGTT GCGGTGATCT GA
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| Protein sequence | MCSRWMVSAW NEEVTESLFM SRKHAFQFLD LPRQMPQRIP VELRTSGDWR ELYGKFDKGE
AQYQAGRCLD CGNPYCSWKC PVHNAIPQWL QLVQENRIDE AAALCHATNP LPEVCGRVCP
QDRLCEGSCT LEEFGAVTIG AVEKYIVDTA LQQGWRPDLS HVQPTGWRVA VVGAGPAGLA
CADRLARAGV QAVVYDRYEQ IGGLLQFGIP SFKLDKAVMS TRRQVLEGMG VEFRLGVEIG
KDLGIEALLE DYDAVFLGVG AYRYTDGGLP GQDLKNVLPA LPFLVQNGRI VSGNDPYGRP
IAGWEDQVQL PDVTGKSVVV LGGGDTGMDC VRSAIRLGTT KVTCIYRRDE ANMPGSAREV
ANAREEGVRF LFNRQPLSIQ SGTDKQAIGV TVVETKLAEP DANGRRNAVP IQGTEAVLEA
DVVIIAFGFS PMLLEWLTAQ GVQASSNGRI VVALSDTGDR LTYQTTHPKL FAGGDCVRGA
DLVVTAVAEG RDAAESIVRW LRATAQVMDV AVI
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