Gene Xfasm12_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2227 
Symbol 
ID6120843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp2346696 
End bp2347199 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID641650168 
Productphosphoribosylaminoimidazole carboxylase 
Protein accessionYP_001776708 
Protein GI170731275 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCCA ATCAATCCCC CCCGCTGGTC GGTATTGTCA TGGGTTCCTC TTCGGATTGG 
GGAGCGATGC AGCACGCCGC ACAAAAGCTC GATGCTCTCA GCGTCGCGTA TGAAGTGAAG 
GTCGTTTCGG CGCATCGTAC TCCGGATAAA TTGTTTGCTT ATGCTGAGCA GGCTGAAGGA 
CGTGGTTTGC GTGCCATCAT TGCCGGGGCC GGTGGTGCAG CGCACCTTCC AGGTATGTTG 
GCGGCTAAGA CGATGGTTCC AGTGTTGGGG GTGCCAATGC AGTCCAGGGC TCTGAATGGT 
TTGGATTCGC TGTTATCGAT CGTACAGATG CCGGCGGGTA TTCCAGTAGC CACGTTCGCG 
ATTGGGGAAG CTGGTGCAGT CAATGCCGCC CTGTTTGCCG CAGCGCTGTT GGTACCCGAA 
AATCCAGCAA TGCGTCGGAT GCTGACTGAG TTCCGCCAAC GTCAGACGGA TCAGGTGAAT 
GCTGCGGACG ATCCACGCCA ATGA
 
Protein sequence
MISNQSPPLV GIVMGSSSDW GAMQHAAQKL DALSVAYEVK VVSAHRTPDK LFAYAEQAEG 
RGLRAIIAGA GGAAHLPGML AAKTMVPVLG VPMQSRALNG LDSLLSIVQM PAGIPVATFA 
IGEAGAVNAA LFAAALLVPE NPAMRRMLTE FRQRQTDQVN AADDPRQ