Gene Xfasm12_2191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2191 
Symbol 
ID6120162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2305643 
End bp2306833 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content50% 
IMG OID641650129 
Productelongation factor Tu 
Protein accessionYP_001776674 
Protein GI170731241 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG ATAAGTTCAA ACGCACTAAG TTGCACGTAA ATGTTGGTAC GATTGGTCAC 
GTTGACCATG GCAAGACTAC ACTGACTGCG GCGCTGACCA AGGTGGGTGC TGAGCGTTTT
GGTGGCGAGT TTAAGGCATA CGATGCGATT GACGCGGCAC CTGAAGAGAA GGCGCGCGGG
ATTACTATTT CTACGGCGCA CGTCGAGTAT GAAACTGAAG TCCGCCACTA TGCCCATGTG
GACTGTCCTG GTCATGCTGA TTATGTGAAA AACATGATTA CAGGTGCGGC GCAGATGGAT
GGTGCGATTT TAGTATGTTC TGCTGCTGAT GGTCCGATGC CTCAGACTCG TGAACACATT
TTGTTGGCTC GCCAGGTGGG TGTGCCTTAC ATTGTTGTGT TCTTGAATAA GGCTGACATG
GTGGATGATG CTGAGTTGCT TGAGCTTGTG GAGATGGAAG TTCGTGAGTT GTTGAGCAAG
TATGATTTTC CTGGTGATGA TACTCCTATT GTGAGAGGTT CTGCGTTGAA GGCGCTGGAG
GGTGATCAGT CTGAGATTGG TGTACCGGCG ATTATTCGAC TGGCGGAAGC ATTAGATACC
CACATTCCGA ATCCGGAGCG TGCGATTGAT CGTCCGTTTT TGATGCCTGT GGAAGATGTG
TTTTCGATTT CTGGTCGTGG CACTGTGGTG ACAGGTCGTA TTGAATGCGG TGTGATTAAG
GTTGGCGATG AGGTGGAAAT CGTTGGCATT CGTCCGACGT CGAAGACGAT TGTTACGGGT
GTTGAGATGT TCCGTAAGTT ATTGGATCAA GGTCAGGCTG GTGACAACGC GGGTCTATTG
TTGCGCGGTA CGAAGCGTGA TGAAGTGGAG CGTGGTCAGG TGTTGGCGAA GCCTGGTTCG
ATCAAGGCGC ATAAAGAATT TGAGGCTGAG GTGTATGTGC TTTCGAAAGA GGAGGGTGGT
CGTCACACTC CGTTTTTCAA TGGATACACT CCGCAGTTTT ATATGCGTAC AACAGACATT
ACAGGTAAGG TGTGTTTACC TGAGGGTGTA GAGATGGTGA TGCCTGGTGA TAATGTGAAG
GTGACAGTAT CGCTGATTAA TCCTGTGGCG ATGGGTGAGG GTCAGCGCTT TGCGATCCGT
GAAGGTGGGC GGACAGTGGG TGCTGGCGTT GTTTCGAAGG TTATTGGTTA A
 
Protein sequence
MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI DAAPEEKARG 
ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IVVFLNKADM VDDAELLELV EMEVRELLSK YDFPGDDTPI VRGSALKALE
GDQSEIGVPA IIRLAEALDT HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK
VGDEVEIVGI RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGS
IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV EMVMPGDNVK
VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG