Gene Xfasm12_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2189 
Symbol 
ID6120160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2303015 
End bp2303884 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID641650127 
Productheat shock protein HtpX 
Protein accessionYP_001776672 
Protein GI170731239 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.436394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACTC GTATTGTCTT ATTTGCCATC ACCAATCTTG CAGTATTGAT TTTAGCTAGC 
ATCGTGATGT CGTTGCTGGG TGTCAATCCG ACACAAATGA GTGGGCTGTT GGTTATGGCT
TTAATTTTGG GCTTCGGTGG TTCGCTTATC TCGCTATTGA TGTCTAAAGC CATCGCTAAG
CATACGACTG GTGCCTATGT GATTGAGCAA CCCAGGAATC CAAGTCAGCG CTGGTTACTA
GACACTGTAA GGCGGCAAGC CGAGATTGTT GGCATCGGCA TGCCTGAGGT AGCTATCTAT
GAGGGACCTG AGATCAATGC TTTTGCAACT GGTGCTGATC GCAACAATGC GCTGGTGGCA
GTATCTACCG GCTTGTTGCA GAACATGAGT CAGGATGAGG CCGAGGCAGT GTTGGGGCAT
GAGATCGCAC ATGTTGCCAA CGGTGACATG GTGACTATGG CGTTGCTGCA GGGTGTGCTT
AATACATTTG TGATCGTACT AGCGCGGGTC GTTGGAGGGT TTATTGACAG TCTGCTTTCC
GGAAATCGTG GTAGTGGTCG TGGTGTTGCT TACTACGGGA TTGTATTGGT ATTGGAATTA
TTGTTTGGTC TTTTTGCAAC GATAATTACC ATGTGGTTTT CGCGTCGTCG TGAGTTTCGT
GCTGATGAGG GCGGTGCATA CTTGGCCGGC CGCAATAAAA TGATTGCTGC ATTAGAGCGG
CTTGGGATTA ACCATGGTCA AAGTACGTTA CCGACGCAGG TGCAAGCTTT TGGTATTTAT
GGCGGTATCG GTGAAGGGCT GCGTAAGCTT TTCTTGAGTC ATCCGCCTTT GAGTGAGCGT
ATTGCTGCGC TTCGTATGGC TAGAGAGTAA
 
Protein sequence
MLTRIVLFAI TNLAVLILAS IVMSLLGVNP TQMSGLLVMA LILGFGGSLI SLLMSKAIAK 
HTTGAYVIEQ PRNPSQRWLL DTVRRQAEIV GIGMPEVAIY EGPEINAFAT GADRNNALVA
VSTGLLQNMS QDEAEAVLGH EIAHVANGDM VTMALLQGVL NTFVIVLARV VGGFIDSLLS
GNRGSGRGVA YYGIVLVLEL LFGLFATIIT MWFSRRREFR ADEGGAYLAG RNKMIAALER
LGINHGQSTL PTQVQAFGIY GGIGEGLRKL FLSHPPLSER IAALRMARE