Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2186 |
Symbol | |
ID | 6120157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2298976 |
End bp | 2299197 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641650124 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001776669 |
Protein GI | 170731236 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.541208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATA CGTCTGATGA TCGTCAGATA GGTACGGTGA AGTGGTTCAA TGATAATAAA GGCTTCGGCT TCATCACCTC GAATAATGGG CCCGACCTGT TCGTCCATTA CCGCGCAATT CAAGGTAATG GGTTTAAGTC CCTTCAGGAA GGTCAGAAAG TTTCTTTCGT TGCTGTGCAA GGCCAGAAAG GTATGCAGGC TGACCAAGTT CAGGTTCTGT AA
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Protein sequence | MSDTSDDRQI GTVKWFNDNK GFGFITSNNG PDLFVHYRAI QGNGFKSLQE GQKVSFVAVQ GQKGMQADQV QVL
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